RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	FDC1	Q03034	503 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	TY1A-DR2	Q03964	440 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	SMP3	Q04174	516 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	SGT1	Q08446	395 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	SPE3	Q12074	293 aa	Known RBP	3.55	□□□□□ -1.84
SOD1	YJR104C	GLO4	Q12320	285 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	SUL2	Q12325	893 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	RAD61	Q99359	647 aa		3.55	□□□□□ -1.84
SOD1	YJR104C	YGL041W-A	P0C5N3	154 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	MRP13	P12686	339 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	CDC34	P14682	295 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	CKA2	P19454	339 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	EXO70	P19658	623 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	ISY1	P21374	235 aa	Predicted RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	APN1	P22936	367 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	PEX34	P25584	144 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	GAR1	P28007	205 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	NIC96	P34077	839 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	TEF4	P36008	412 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	GRX7	P38068	203 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	YPK3	P38070	525 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	KAP104	P38217	918 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	YBR138C	P38277	524 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	YBR238C	P38330	731 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	GOS1	P38736	223 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	MED6	P38782	295 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	SET5	P38890	526 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	STN1	P38960	494 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	SEC31	P38968	1273 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	MSS4	P38994	779 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	MEF2	P39677	819 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	OAF1	P39720	1047 aa	Predicted RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	MTW1	P39731	289 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	PIC2	P40035	300 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	MNT3	P40549	630 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	FMP32	P43557	207 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	YJR124C	P47159	448 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	NMA2	P53204	395 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	UTP8	P53276	713 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	RPL22B	P56628	122 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	SED5	Q01590	340 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	MDM1	Q01846	1127 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	EGD1	Q02642	157 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	GCN5	Q03330	439 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	HER2	Q03557	464 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	FMN1	Q03778	218 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	RRP17	Q04031	235 aa	Predicted RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	DBP9	Q06218	594 aa	Known RBP	3.54	□□□□□ -1.84
SOD1	YJR104C	BCP1	Q06338	283 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	YPR196W	Q06595	470 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	SYT1	Q06836	1226 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	BRE4	Q07660	1125 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	TRE1	Q08919	783 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	YPL260W	Q08977	551 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	AIM41	Q12032	185 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	RCN2	Q12044	265 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	RTR2	Q12378	196 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	APM4	Q99186	491 aa		3.54	□□□□□ -1.84
SOD1	YJR104C	RIF1	P29539	1916 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	CCP1	P00431	361 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	GCR1	P07261	785 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	ILV2	P07342	687 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	TUB3	P09734	445 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	PMA2	P19657	947 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	CMK2	P22517	447 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	HXT2	P23585	541 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	RVS161	P25343	265 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	CPR3	P25719	182 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	CMK1	P27466	446 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	IMP2'	P32351	346 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	MRS6	P32864	603 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	XRS2	P33301	854 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	STB6	P36085	766 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	ANR2	P36090	516 aa	Predicted RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	UTP30	P36144	274 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	DIA4	P38705	446 aa	Predicted RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	YHI9	P38765	294 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	TRM5	P38793	499 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	APE4	P38821	490 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	SPC97	P38863	823 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	UTP9	P38882	575 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	ACO2	P39533	789 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	GDH3	P39708	457 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	MAM33	P40513	266 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	LSM1	P47017	172 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	MND1	P53102	219 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	GUP1	P53154	560 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	COG2	P53271	262 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	BSC5	P53755	489 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	UTP6	Q02354	440 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	YDR476C	Q03362	224 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	YMR226C	Q05016	267 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	PEX10	Q05568	337 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	RGA2	Q06407	1009 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	TDA5	Q06417	326 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
SOD1	YJR104C	DIS3	Q08162	1001 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	YAP7	Q08182	245 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	RAX1	Q08760	435 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	SNX3	Q08826	162 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms