RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W VMA13P41807 478 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W COS4P43542 379 aa5.86□□□□□ -1.47
SKN1YGR143W COS5P47187 383 aa5.86□□□□□ -1.47
SKN1YGR143W YML6P51998 286 aa5.86□□□□□ -1.47
SKN1YGR143W KXD1P53158 218 aa5.86□□□□□ -1.47
SKN1YGR143W PBP1P53297 722 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W COS1P53822 381 aa5.86□□□□□ -1.47
SKN1YGR143W ARL3Q02804 198 aa5.86□□□□□ -1.47
SKN1YGR143W PLM2Q04383 521 aa5.86□□□□□ -1.47
SKN1YGR143W YLR345WQ06137 509 aa5.86□□□□□ -1.47
SKN1YGR143W GSH2Q08220 491 aa5.86□□□□□ -1.47
SKN1YGR143W CUE5Q08412 411 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W PUS9Q12069 462 aa5.86□□□□□ -1.47
SKN1YGR143W DGK1Q12382 290 aa5.86□□□□□ -1.47
SKN1YGR143W PNS1Q12412 539 aa5.86□□□□□ -1.47
SKN1YGR143W RAD61Q99359 647 aa5.86□□□□□ -1.47
SKN1YGR143W POL3P15436 1097 aa5.85□□□□□ -1.47
SKN1YGR143W KGD1P20967 1014 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W RNR3P21672 869 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W YCR051WP25631 222 aa5.85□□□□□ -1.47
SKN1YGR143W PEX3P28795 441 aa5.85□□□□□ -1.47
SKN1YGR143W CHS3P29465 1165 aa5.85□□□□□ -1.47
SKN1YGR143W HMX1P32339 317 aa5.85□□□□□ -1.47
SKN1YGR143W NIC96P34077 839 aa5.85□□□□□ -1.47
SKN1YGR143W LAS1P36146 502 aaPredicted RBP5.85□□□□□ -1.47
SKN1YGR143W SKG1P36169 355 aa5.85□□□□□ -1.47
SKN1YGR143W YHR202WP38887 602 aa5.85□□□□□ -1.47
SKN1YGR143W MNL1P38888 796 aa5.85□□□□□ -1.47
SKN1YGR143W SIP5P40210 489 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W YGR210CP42942 411 aa5.85□□□□□ -1.47
SKN1YGR143W ENT3P47160 408 aa5.85□□□□□ -1.47
SKN1YGR143W NCS6P53088 359 aa5.85□□□□□ -1.47
SKN1YGR143W FOL1P53848 824 aa5.85□□□□□ -1.47
SKN1YGR143W YDR476CQ03362 224 aa5.85□□□□□ -1.47
SKN1YGR143W URC2Q04411 772 aa5.85□□□□□ -1.47
SKN1YGR143W ISR1Q06098 443 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W VTA1Q06263 330 aa5.85□□□□□ -1.47
SKN1YGR143W ULA1Q12059 462 aa5.85□□□□□ -1.47
SKN1YGR143W RPN5Q12250 445 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W ATG31Q12421 196 aa5.85□□□□□ -1.47
SKN1YGR143W VCX1Q99385 411 aa5.85□□□□□ -1.47
SKN1YGR143W GPM1P00950 247 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W MF(ALPHA)1P01149 165 aa5.85□□□□□ -1.47
SKN1YGR143W MATALPHA1P0CY06 175 aa5.85□□□□□ -1.47
SKN1YGR143W HMLALPHA1P0CY07 175 aa5.85□□□□□ -1.47
SKN1YGR143W WHI2P12611 486 aa5.85□□□□□ -1.47
SKN1YGR143W ABF1P14164 731 aa5.85□□□□□ -1.47
SKN1YGR143W GSH1P32477 678 aa5.85□□□□□ -1.47
SKN1YGR143W RPD3P32561 433 aa5.85□□□□□ -1.47
SKN1YGR143W SEC61P32915 480 aa5.85□□□□□ -1.47
SKN1YGR143W TGL4P36165 910 aa5.85□□□□□ -1.47
SKN1YGR143W RIM4P38741 713 aa5.85□□□□□ -1.47
SKN1YGR143W LRP1P38801 184 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W YEN1P40028 759 aa5.85□□□□□ -1.47
SKN1YGR143W YRB2P40517 327 aa5.85□□□□□ -1.47
SKN1YGR143W RRN7P40992 514 aa5.85□□□□□ -1.47
SKN1YGR143W SPO74P45819 413 aa5.85□□□□□ -1.47
SKN1YGR143W YJL007CP47080 104 aa5.85□□□□□ -1.47
SKN1YGR143W MSE1P48525 536 aa5.85□□□□□ -1.47
SKN1YGR143W YGL036WP53185 909 aaPredicted RBP5.85□□□□□ -1.47
SKN1YGR143W HDA1P53973 706 aa5.85□□□□□ -1.47
SKN1YGR143W RNY1Q02933 434 aaKnown RBP5.85□□□□□ -1.47
SKN1YGR143W YDR239CQ03780 787 aa5.85□□□□□ -1.47
SKN1YGR143W FAR10Q06001 478 aa5.85□□□□□ -1.47
SKN1YGR143W GIS3Q12418 502 aa5.85□□□□□ -1.47
SKN1YGR143W RPN13O13563 156 aa5.84□□□□□ -1.47
SKN1YGR143W MET2P08465 486 aa5.84□□□□□ -1.47
SKN1YGR143W HMG2P12684 1045 aa5.84□□□□□ -1.47
SKN1YGR143W PRP2P20095 876 aaPredicted RBP5.84□□□□□ -1.47
SKN1YGR143W SPT14P32363 452 aa5.84□□□□□ -1.47
SKN1YGR143W IMP3P32899 183 aaPredicted RBP5.84□□□□□ -1.47
SKN1YGR143W VPS17P32913 551 aa5.84□□□□□ -1.47
SKN1YGR143W RGI2P40188 164 aa5.84□□□□□ -1.47
SKN1YGR143W TMA108P40462 946 aa5.84□□□□□ -1.47
SKN1YGR143W GTT1P40582 234 aa5.84□□□□□ -1.47
SKN1YGR143W PSA1P41940 361 aaKnown RBP5.84□□□□□ -1.47
SKN1YGR143W ASE1P50275 885 aa5.84□□□□□ -1.47
SKN1YGR143W RPN14P53196 417 aa5.84□□□□□ -1.47
SKN1YGR143W RPS15Q01855 142 aaKnown RBP5.84□□□□□ -1.47
SKN1YGR143W UTP5Q04177 643 aaKnown RBP5.84□□□□□ -1.47
SKN1YGR143W PAL1Q05518 499 aaKnown RBP5.84□□□□□ -1.47
SKN1YGR143W SKG3Q06315 1026 aa5.84□□□□□ -1.47
SKN1YGR143W MRL1Q06815 381 aa5.84□□□□□ -1.47
SKN1YGR143W PUT2P07275 575 aa5.83□□□□□ -1.48
SKN1YGR143W CAR2P07991 424 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W TUB1P09733 447 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W PDC5P16467 563 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W SAM2P19358 384 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W DBP1P24784 617 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W CIN8P27895 1000 aa5.83□□□□□ -1.48
SKN1YGR143W SSH4P32343 579 aa5.83□□□□□ -1.48
SKN1YGR143W SAC1P32368 623 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W MCX1P38323 520 aaPredicted RBP5.83□□□□□ -1.48
SKN1YGR143W ERG7P38604 731 aa5.83□□□□□ -1.48
SKN1YGR143W GIM4P40005 111 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W SMX2P40204 77 aaKnown RBP5.83□□□□□ -1.48
SKN1YGR143W ARF3P40994 183 aaRIP-Chip data5.83□□□□□ -1.48not detected
SKN1YGR143W SKP2P42843 763 aa5.83□□□□□ -1.48
SKN1YGR143W NET1P47035 1189 aa5.83□□□□□ -1.48
SKN1YGR143W YPT11P48559 417 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms