RNA–Protein interactions for RNA: YGL088W

YGL088W, Transcript of Dubious open reading frame, yeast

Gene YGL088W, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGL088W	YGL088W	SAP4	P53036	818 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	GPG1	P53130	126 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	GUP1	P53154	560 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	MEP3	P53390	489 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	LSC1	P53598	329 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	UME1	Q03010	460 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	YMR178W	Q03219	274 aa	Known RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	RRP17	Q04031	235 aa	Predicted RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	PNP1	Q05788	311 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	YDL218W	Q07629	317 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	FAP7	Q12055	197 aa	Predicted RBP	4.24	□□□□□ -1.73
YGL088W	YGL088W	GNT1	Q12096	491 aa		4.24	□□□□□ -1.73
YGL088W	YGL088W	FUR4	P05316	633 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	MIS1	P09440	975 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	CKA2	P19454	339 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	VAN1	P23642	535 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	DMC1	P25453	334 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	DBF4	P32325	704 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	NTH1	P32356	751 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	NIP1	P32497	812 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	SRB4	P32569	687 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	MUD1	P32605	298 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	NIC96	P34077	839 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	CUE2	P36075	443 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	TAT1	P38085	619 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	MAK5	P38112	773 aa	Predicted RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	QNS1	P38795	714 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	MTW1	P39731	289 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	LSM4	P40070	187 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	PKP1	P40530	394 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	MKT1	P40850	830 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	AXL1	P40851	1208 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	GAT1	P43574	510 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	RBG2	P53295	368 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	MRPL19	P53875	158 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	GTR1	Q00582	310 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	RPC11	Q04307	110 aa	Predicted RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	SPG3	Q04398	127 aa	Predicted RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	DPB4	Q04603	196 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	GSF2	Q04697	403 aa	Known RBP	4.23	□□□□□ -1.73
YGL088W	YGL088W	GLO2	Q05584	274 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	HRD3	Q05787	833 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	STP3	Q05937	343 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	YCS4	Q06156	1176 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	ATG10	Q07879	167 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	LOT6	Q07923	191 aa		4.23	□□□□□ -1.73
YGL088W	YGL088W	PHO4	P07270	312 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	ILS1	P09436	1072 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	PWP1	P21304	576 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	SAN1	P22470	610 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	SBA1	P28707	216 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	PAP1	P29468	568 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	HEM12	P32347	362 aa	Predicted RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	PET309	P32522	965 aa	Predicted RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	TIM17	P39515	158 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	GPP2	P40106	250 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	KHA1	P40309	873 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	SEC28	P40509	296 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	THI6	P41835	540 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	YRB1	P41920	201 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	MET12	P46151	657 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	BNA3	P47039	444 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	RTT101	P47050	842 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	BUD9	P53226	547 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	DCP2	P53550	970 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	PRM1	P53835	661 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	YDR131C	Q03899	556 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	YET2	Q04210	160 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	TAF11	Q04226	346 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	TDA9	Q04545	1251 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	RCL1	Q08096	367 aa	Predicted RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	PEX15	Q08215	383 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	FAL1	Q12099	399 aa	Known RBP	4.22	□□□□□ -1.73
YGL088W	YGL088W	YDR262W	Q12331	272 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	SFI1	Q12369	946 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	ARP7	Q12406	477 aa		4.22	□□□□□ -1.73
YGL088W	YGL088W	LAT1	P12695	482 aa	Known RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	PDX1	P16451	410 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	PRP6	P19735	899 aa	Predicted RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	ADH7	P25377	361 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	VMA3	P25515	160 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	MSH1	P25846	959 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	ZUO1	P32527	433 aa	Known RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	DOA4	P32571	926 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	PMT1	P33775	817 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	ARL1	P38116	183 aa	Known RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	CCZ1	P38273	704 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	EXO5	P38289	585 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	MSR1	P38714	643 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	RRM3	P38766	723 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	SSZ1	P38788	538 aa	Known RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	YAL037W	P39728	267 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	GID8	P40208	455 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	HXT8	P40886	569 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	ROK1	P45818	564 aa	Predicted RBP	4.21	□□□□□ -1.74
YGL088W	YGL088W	PFD1	P46988	109 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	NBP35	P52920	328 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	INN1	P53901	409 aa		4.21	□□□□□ -1.74
YGL088W	YGL088W	SPO19	Q03029	223 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms