RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C NAS6P50086 228 aa6.46□□□□□ -1.38
YPT1YFL038C YGR053CP53234 283 aa6.46□□□□□ -1.38
YPT1YFL038C IBD2P53892 351 aa6.46□□□□□ -1.38
YPT1YFL038C YNL033WP53964 284 aa6.46□□□□□ -1.38
YPT1YFL038C YNL019CP53975 284 aa6.46□□□□□ -1.38
YPT1YFL038C RPL34AP87262 121 aaPredicted RBP6.46□□□□□ -1.38
YPT1YFL038C PRP38Q00723 242 aaPredicted RBP6.46□□□□□ -1.38
YPT1YFL038C SVL3Q03088 825 aaKnown RBP6.46□□□□□ -1.38
YPT1YFL038C PIR3Q03180 325 aa6.46□□□□□ -1.38
YPT1YFL038C GCN5Q03330 439 aa6.46□□□□□ -1.38
YPT1YFL038C RAD30Q04049 632 aa6.46□□□□□ -1.38
YPT1YFL038C TRE2Q08693 809 aa6.46□□□□□ -1.38
YPT1YFL038C MRH1Q12117 320 aaPredicted RBP6.46□□□□□ -1.38
YPT1YFL038C MAM3Q12296 706 aa6.46□□□□□ -1.38
YPT1YFL038C PSY3Q12318 242 aa6.46□□□□□ -1.38
YPT1YFL038C SRF1Q12516 437 aa6.46□□□□□ -1.38
YPT1YFL038C YLR149CQ99296 730 aa6.46□□□□□ -1.38
YPT1YFL038C TOP3P13099 656 aa6.45□□□□□ -1.38
YPT1YFL038C AMD1P15274 810 aaKnown RBP6.45□□□□□ -1.38
YPT1YFL038C CCA1P21269 546 aa6.45□□□□□ -1.38
YPT1YFL038C CNA1P23287 553 aa6.45□□□□□ -1.38
YPT1YFL038C PHO3P24031 467 aa6.45□□□□□ -1.38
YPT1YFL038C CLB3P24870 427 aa6.45□□□□□ -1.38
YPT1YFL038C MF(ALPHA)2P32435 120 aa6.45□□□□□ -1.38
YPT1YFL038C WHI3P34761 661 aaKnown RBP6.45□□□□□ -1.38
YPT1YFL038C MRP8P35719 219 aa6.45□□□□□ -1.38
YPT1YFL038C YKR051WP36142 418 aa6.45□□□□□ -1.38
YPT1YFL038C SKG1P36169 355 aa6.45□□□□□ -1.38
YPT1YFL038C POL12P38121 705 aaPredicted RBP6.45□□□□□ -1.38
YPT1YFL038C ROT2P38138 954 aa6.45□□□□□ -1.38
YPT1YFL038C TDP1P38319 544 aa6.45□□□□□ -1.38
YPT1YFL038C YHR045WP38775 560 aa6.45□□□□□ -1.38
YPT1YFL038C GIP4P39732 760 aa6.45□□□□□ -1.38
YPT1YFL038C BST1P43571 1029 aa6.45□□□□□ -1.38
YPT1YFL038C MRK1P50873 501 aa6.45□□□□□ -1.38
YPT1YFL038C PXR1P53335 271 aaPredicted RBP6.45□□□□□ -1.38
YPT1YFL038C TRM112P53738 135 aaPredicted RBP6.45□□□□□ -1.38
YPT1YFL038C ASI1P54074 624 aa6.45□□□□□ -1.38
YPT1YFL038C YDR239CQ03780 787 aa6.45□□□□□ -1.38
YPT1YFL038C YML083CQ04526 418 aa6.45□□□□□ -1.38
YPT1YFL038C YMR226CQ05016 267 aaKnown RBP6.45□□□□□ -1.38
YPT1YFL038C GPB1Q08886 897 aa6.45□□□□□ -1.38
YPT1YFL038C ULA1Q12059 462 aa6.45□□□□□ -1.38
YPT1YFL038C YLR049CQ12110 428 aa6.45□□□□□ -1.38
YPT1YFL038C CBP2P03874 630 aaPredicted RBP6.44□□□□□ -1.38
YPT1YFL038C COR1P07256 457 aa6.44□□□□□ -1.38
YPT1YFL038C POL4P25615 582 aa6.44□□□□□ -1.38
YPT1YFL038C ADK2P26364 225 aa6.44□□□□□ -1.38
YPT1YFL038C MET22P32179 357 aa6.44□□□□□ -1.38
YPT1YFL038C TYE7P33122 291 aaPredicted RBP6.44□□□□□ -1.38
YPT1YFL038C PEX6P33760 1030 aa6.44□□□□□ -1.38
YPT1YFL038C SPC42P36094 363 aa6.44□□□□□ -1.38
YPT1YFL038C CAF4P36130 643 aa6.44□□□□□ -1.38
YPT1YFL038C UIP5P36137 443 aa6.44□□□□□ -1.38
YPT1YFL038C TFA2P36145 328 aa6.44□□□□□ -1.38
YPT1YFL038C APM3P38153 483 aa6.44□□□□□ -1.38
YPT1YFL038C YHL012WP38709 493 aa6.44□□□□□ -1.38
YPT1YFL038C BFA1P47113 574 aa6.44□□□□□ -1.38
YPT1YFL038C PRP24P49960 444 aaKnown RBP6.44□□□□□ -1.38
YPT1YFL038C SAP4P53036 818 aa6.44□□□□□ -1.38
YPT1YFL038C CLD1P53264 445 aa6.44□□□□□ -1.38
YPT1YFL038C DSL1P53847 754 aa6.44□□□□□ -1.38
YPT1YFL038C YNL095CP53932 642 aa6.44□□□□□ -1.38
YPT1YFL038C SPP1Q03012 353 aa6.44□□□□□ -1.38
YPT1YFL038C GOT1Q03554 138 aa6.44□□□□□ -1.38
YPT1YFL038C TAF12Q03761 539 aa6.44□□□□□ -1.38
YPT1YFL038C RCO1Q04779 684 aa6.44□□□□□ -1.38
YPT1YFL038C NUT2Q06213 157 aa6.44□□□□□ -1.38
YPT1YFL038C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
YPT1YFL038C VIK1Q12045 647 aa6.44□□□□□ -1.38
YPT1YFL038C ICT1Q12385 394 aa6.44□□□□□ -1.38
YPT1YFL038C LPX1Q12405 387 aaKnown RBP6.44□□□□□ -1.38
YPT1YFL038C SUC2P00724 532 aa6.43□□□□□ -1.38
YPT1YFL038C SPT3P06844 337 aa6.43□□□□□ -1.38
YPT1YFL038C COS2P0CX12 379 aa6.43□□□□□ -1.38
YPT1YFL038C COS3P0CX13 379 aa6.43□□□□□ -1.38
YPT1YFL038C SBP1P10080 294 aaKnown RBP6.43□□□□□ -1.38
YPT1YFL038C KSS1P14681 368 aa6.43□□□□□ -1.38
YPT1YFL038C PMA2P19657 947 aa6.43□□□□□ -1.38
YPT1YFL038C FAR1P21268 830 aa6.43□□□□□ -1.38
YPT1YFL038C YCK2P23292 546 aaKnown RBP6.43□□□□□ -1.38
YPT1YFL038C MIH1P23748 554 aa6.43□□□□□ -1.38
YPT1YFL038C DPB2P24482 689 aaPredicted RBP6.43□□□□□ -1.38
YPT1YFL038C DMC1P25453 334 aa6.43□□□□□ -1.38
YPT1YFL038C RAD51P25454 400 aa6.43□□□□□ -1.38
YPT1YFL038C SGF29P25554 259 aa6.43□□□□□ -1.38
YPT1YFL038C CIN8P27895 1000 aa6.43□□□□□ -1.38
YPT1YFL038C FUN30P31380 1131 aa6.43□□□□□ -1.38
YPT1YFL038C RPC82P32349 654 aa6.43□□□□□ -1.38
YPT1YFL038C STE14P32584 239 aa6.43□□□□□ -1.38
YPT1YFL038C RPS1AP33442 255 aaKnown RBP6.43□□□□□ -1.38
YPT1YFL038C LHS1P36016 881 aa6.43□□□□□ -1.38
YPT1YFL038C LDB7P38210 180 aa6.43□□□□□ -1.38
YPT1YFL038C YBR285WP38354 144 aa6.43□□□□□ -1.38
YPT1YFL038C ARP1P38696 384 aa6.43□□□□□ -1.38
YPT1YFL038C GND1P38720 489 aaKnown RBP6.43□□□□□ -1.38
YPT1YFL038C ALG8P40351 577 aa6.43□□□□□ -1.38
YPT1YFL038C COS4P43542 379 aa6.43□□□□□ -1.38
YPT1YFL038C EMC2P47133 292 aaKnown RBP6.43□□□□□ -1.38
YPT1YFL038C SHY1P53266 389 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms