RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C AXL1P40851 1208 aa1.38□□□□□ -2.19
SWI4YER111C ZIM17P42844 174 aa1.38□□□□□ -2.19
SWI4YER111C SMX3P54999 86 aaPredicted RBP1.38□□□□□ -2.19
SWI4YER111C MAK10Q02197 733 aa1.38□□□□□ -2.19
SWI4YER111C YVH1Q02256 364 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C MRI1Q06489 411 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C APL4Q12028 832 aa1.38□□□□□ -2.19
SWI4YER111C NMD4Q12129 218 aa1.38□□□□□ -2.19
SWI4YER111C CHD1P32657 1468 aa1.38□□□□□ -2.19
SWI4YER111C CET1O13297 549 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C HEM1P09950 548 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C PDA1P16387 420 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C APN1P22936 367 aa1.37□□□□□ -2.19
SWI4YER111C PMI40P29952 429 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C MSS51P32335 436 aa1.37□□□□□ -2.19
SWI4YER111C THI80P35202 319 aa1.37□□□□□ -2.19
SWI4YER111C NTR2P36118 322 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C YPT10P38146 199 aa1.37□□□□□ -2.19
SWI4YER111C VID24P38263 362 aa1.37□□□□□ -2.19
SWI4YER111C LCB2P40970 561 aa1.37□□□□□ -2.19
SWI4YER111C YFL015CP43578 164 aa1.37□□□□□ -2.19
SWI4YER111C CTK2P46962 323 aa1.37□□□□□ -2.19
SWI4YER111C MNP1P53163 194 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C ECM30Q06673 1274 aa1.37□□□□□ -2.19
SWI4YER111C FMP40Q08968 688 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C BAG7Q12128 409 aa1.37□□□□□ -2.19
SWI4YER111C PRS5Q12265 496 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C AVL9Q12500 764 aa1.37□□□□□ -2.19
SWI4YER111C YPT6Q99260 215 aa1.37□□□□□ -2.19
SWI4YER111C VMR1P38735 1592 aa1.37□□□□□ -2.19
SWI4YER111C KAR3P17119 729 aa1.37□□□□□ -2.19
SWI4YER111C DPH2P32461 534 aa1.37□□□□□ -2.19
SWI4YER111C VPH1P32563 840 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C YME1P32795 747 aa1.37□□□□□ -2.19
SWI4YER111C PMT1P33775 817 aa1.37□□□□□ -2.19
SWI4YER111C GCS1P35197 352 aa1.37□□□□□ -2.19
SWI4YER111C HES1P35843 434 aa1.37□□□□□ -2.19
SWI4YER111C BDH2P39713 417 aa1.37□□□□□ -2.19
SWI4YER111C YEL057CP39983 233 aa1.37□□□□□ -2.19
SWI4YER111C OPT1P40897 799 aa1.37□□□□□ -2.19
SWI4YER111C SWP82P43554 623 aa1.37□□□□□ -2.19
SWI4YER111C YFR020WP43600 232 aa1.37□□□□□ -2.19
SWI4YER111C MSY1P48527 492 aa1.37□□□□□ -2.19
SWI4YER111C ATP22P50273 684 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C GND2P53319 492 aa1.37□□□□□ -2.19
SWI4YER111C IST1P53843 298 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C DUG3P53871 357 aa1.37□□□□□ -2.19
SWI4YER111C YNL092WP53934 400 aa1.37□□□□□ -2.19
SWI4YER111C FMP30Q02883 468 aa1.37□□□□□ -2.19
SWI4YER111C EMI2Q04409 500 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C LUC7Q07508 261 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C PCL8Q08966 492 aa1.37□□□□□ -2.19
SWI4YER111C LCB4Q12246 624 aa1.37□□□□□ -2.19
SWI4YER111C YOL159C-AQ3E769 90 aa1.37□□□□□ -2.19
SWI4YER111C USO1P25386 1790 aa1.37□□□□□ -2.19
SWI4YER111C CHO2P05374 869 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C DFR1P07807 211 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
SWI4YER111C MRP2P10663 115 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C PPH22P23595 377 aa1.37□□□□□ -2.19
SWI4YER111C SAT4P25333 603 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C AAD3P25612 363 aa1.37□□□□□ -2.19
SWI4YER111C PTC6P25646 442 aa1.37□□□□□ -2.19
SWI4YER111C ERV1P27882 189 aa1.37□□□□□ -2.19
SWI4YER111C ERG3P32353 365 aa1.37□□□□□ -2.19
SWI4YER111C GSH1P32477 678 aa1.37□□□□□ -2.19
SWI4YER111C MNN2P38069 597 aa1.37□□□□□ -2.19
SWI4YER111C YMC2P38087 329 aa1.37□□□□□ -2.19
SWI4YER111C SMF1P38925 575 aa1.37□□□□□ -2.19
SWI4YER111C SEC31P38968 1273 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C PET130P47065 347 aa1.37□□□□□ -2.19
SWI4YER111C IMD4P50094 524 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C STR3P53101 465 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C SGF73P53165 657 aa1.37□□□□□ -2.19
SWI4YER111C CAF130P53280 1122 aaPredicted RBP1.37□□□□□ -2.19
SWI4YER111C RAD33Q04231 177 aa1.37□□□□□ -2.19
SWI4YER111C ESC8Q08119 714 aa1.37□□□□□ -2.19
SWI4YER111C LEU9Q12166 604 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C PAR32Q12515 295 aaKnown RBP1.37□□□□□ -2.19
SWI4YER111C AFI1Q99222 893 aa1.37□□□□□ -2.19
SWI4YER111C ADE5,7P07244 802 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C MRP13P12686 339 aa1.36□□□□□ -2.19
SWI4YER111C SPO11P23179 398 aa1.36□□□□□ -2.19
SWI4YER111C ECM32P32644 1121 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C MDL1P33310 695 aa1.36□□□□□ -2.19
SWI4YER111C OTU2P38747 307 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C MIT1P40002 666 aa1.36□□□□□ -2.19
SWI4YER111C JEM1P40358 645 aa1.36□□□□□ -2.19
SWI4YER111C RPS15Q01855 142 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C SLK19Q08581 821 aaKnown RBP1.36□□□□□ -2.19
SWI4YER111C GPN2Q08726 347 aaPredicted RBP1.36□□□□□ -2.19
SWI4YER111C LEA1Q08963 238 aaPredicted RBP1.36□□□□□ -2.19
SWI4YER111C ATG29Q12092 213 aa1.36□□□□□ -2.19
SWI4YER111C MRH1Q12117 320 aaPredicted RBP1.36□□□□□ -2.19
SWI4YER111C SPE4Q12455 300 aa1.36□□□□□ -2.19
SWI4YER111C PMS1P14242 873 aa1.36□□□□□ -2.19
SWI4YER111C YCR006CP25350 157 aa1.36□□□□□ -2.19
SWI4YER111C IMG1P25626 169 aa1.36□□□□□ -2.19
SWI4YER111C YCR051WP25631 222 aa1.36□□□□□ -2.19
SWI4YER111C ADK2P26364 225 aa1.36□□□□□ -2.19
SWI4YER111C NPL6P32832 435 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms