RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	GTT2	Q12390	233 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	BEM2	P39960	2167 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	PHO5	P00635	467 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	HEM2	P05373	342 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	PHO84	P25297	587 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	NPP1	P25353	742 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	RFA2	P26754	273 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	MVD1	P32377	396 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	SFP1	P32432	683 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	SKT5	P34226	696 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	HSE1	P38753	452 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	ERP5	P38819	212 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	SEC31	P38968	1273 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	COA1	P40452	197 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	PRM2	P40534	656 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	NPY1	P53164	384 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	BIO5	P53744	561 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	IBD2	P53892	351 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	SLM2	P53955	656 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	GAS3	Q03655	524 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	CLU1	Q03690	1277 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	CCE1	Q03702	353 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	TAF12	Q03761	539 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	TRM12	Q04235	462 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	HEL2	Q05580	639 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	VTA1	Q06263	330 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	ALR1	Q08269	859 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	GNT1	Q12096	491 aa		7.19	□□□□□ -1.26
SKP1	YDR328C	MEX67	Q99257	599 aa	Known RBP	7.19	□□□□□ -1.26
SKP1	YDR328C	SEM1	O94742	89 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	PRP4	P20053	465 aa	Known RBP	7.18	□□□□□ -1.26
SKP1	YDR328C	SEC15	P22224	910 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	ARG1	P22768	420 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	RFC3	P38629	340 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	YHR020W	P38708	688 aa	Known RBP	7.18	□□□□□ -1.26
SKP1	YDR328C	YHR078W	P38799	552 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	CYC2	P38909	366 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	SSN3	P39073	555 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	UBP6	P43593	499 aa	Known RBP	7.18	□□□□□ -1.26
SKP1	YDR328C	TIS11	P47977	285 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	AQR1	P53943	586 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	LSM3	P57743	89 aa	Known RBP	7.18	□□□□□ -1.26
SKP1	YDR328C	SSL1	Q04673	461 aa	Predicted RBP	7.18	□□□□□ -1.26
SKP1	YDR328C	HPF1	Q05164	967 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	VAM6	Q07468	1049 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	Q0182	Q9ZZW1	134 aa		7.18	□□□□□ -1.26
SKP1	YDR328C	RAD3	P06839	778 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	CPA1	P07258	411 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	NMT1	P14743	455 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	CHL1	P22516	861 aa	Predicted RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	CLB1	P24868	471 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	SNT1	P25357	1226 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	OXP1	P28273	1286 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	CSE1	P33307	960 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	SIP2	P34164	415 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	EAP1	P36041	632 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	GMH1	P36125	273 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	RIM11	P38615	370 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	BZZ1	P38822	633 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	PIK1	P39104	1066 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	TMA22	P47089	198 aa	Predicted RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	RNR4	P49723	345 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	EFM5	P53200	248 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	SHY1	P53266	389 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	TGL2	P54857	326 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	UBP2	Q01476	1272 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	SPC24	Q04477	213 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	ATG10	Q07879	167 aa		7.17	□□□□□ -1.26
SKP1	YDR328C	SAM4	Q08985	325 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	AHA1	Q12449	350 aa	Known RBP	7.17	□□□□□ -1.26
SKP1	YDR328C	SUC2	P00724	532 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	INH1	P01097	85 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	SPT3	P06844	337 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	SWI5	P08153	709 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YKR104W	P0CE69	306 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YAR066W	P0CX18	203 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YHR214W	P0CX19	203 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	PMR1	P13586	950 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	ART10	P18634	518 aa	Known RBP	7.16	□□□□□ -1.26
SKP1	YDR328C	YSR3	P23501	404 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	MLS1	P30952	554 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	NUP120	P35729	1037 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YPT52	P36018	234 aa	Known RBP	7.16	□□□□□ -1.26
SKP1	YDR328C	YKL151C	P36059	337 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	TAE1	P38340	232 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	CCT6	P39079	546 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	VMA13	P41807	478 aa	Known RBP	7.16	□□□□□ -1.26
SKP1	YDR328C	YFR018C	P43599	363 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	NNF1	P47149	201 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	NBP35	P52920	328 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YGL108C	P53139	140 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	ART5	P53244	586 aa	Known RBP	7.16	□□□□□ -1.26
SKP1	YDR328C	YML131W	Q03102	365 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YDR338C	Q05497	695 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	RIF2	Q06208	395 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	RSC3	Q06639	885 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YDL121C	Q07541	149 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	GPB1	Q08886	897 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	MCD1	Q12158	566 aa		7.16	□□□□□ -1.26
SKP1	YDR328C	YOL087C	Q99247	1116 aa		7.16	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms