RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C VTA1Q06263 330 aa4.7□□□□□ -1.66
SPR28YDR218C ICL2Q12031 575 aa4.7□□□□□ -1.66
SPR28YDR218C VPS54Q12071 889 aa4.7□□□□□ -1.66
SPR28YDR218C SWT1Q12104 458 aa4.7□□□□□ -1.66
SPR28YDR218C CHS5Q12114 671 aaKnown RBP4.7□□□□□ -1.66
SPR28YDR218C SWM1Q12379 170 aa4.7□□□□□ -1.66
SPR28YDR218C RPL1AP0CX43 217 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C RPL1BP0CX44 217 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C MSS116P15424 664 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C PRP45P28004 379 aaPredicted RBP4.69□□□□□ -1.66
SPR28YDR218C SPC110P32380 944 aa4.69□□□□□ -1.66
SPR28YDR218C HCS1P34243 683 aa4.69□□□□□ -1.66
SPR28YDR218C CMC1P36064 111 aa4.69□□□□□ -1.66
SPR28YDR218C YBR053CP38235 358 aa4.69□□□□□ -1.66
SPR28YDR218C YSW1P38280 609 aa4.69□□□□□ -1.66
SPR28YDR218C DED81P38707 554 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C YHR078WP38799 552 aa4.69□□□□□ -1.66
SPR28YDR218C SFB3P38810 929 aa4.69□□□□□ -1.66
SPR28YDR218C PEX18P38855 283 aa4.69□□□□□ -1.66
SPR28YDR218C LCL3P53153 274 aa4.69□□□□□ -1.66
SPR28YDR218C TIM44Q01852 431 aa4.69□□□□□ -1.66
SPR28YDR218C REC102Q02721 264 aa4.69□□□□□ -1.66
SPR28YDR218C LGE1Q02796 332 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C INP2Q03824 705 aa4.69□□□□□ -1.66
SPR28YDR218C ARX1Q03862 593 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C VPS38Q05919 439 aa4.69□□□□□ -1.66
SPR28YDR218C KAP95Q06142 861 aaKnown RBP4.69□□□□□ -1.66
SPR28YDR218C YLR413WQ06689 675 aa4.69□□□□□ -1.66
SPR28YDR218C SUL2Q12325 893 aa4.69□□□□□ -1.66
SPR28YDR218C VCX1Q99385 411 aa4.69□□□□□ -1.66
SPR28YDR218C MET3P08536 511 aa4.68□□□□□ -1.66
SPR28YDR218C TAL1P15019 335 aaKnown RBP4.68□□□□□ -1.66
SPR28YDR218C IME1P21190 360 aa4.68□□□□□ -1.66
SPR28YDR218C KIN82P25341 720 aa4.68□□□□□ -1.66
SPR28YDR218C YIH1P25637 258 aa4.68□□□□□ -1.66
SPR28YDR218C ARC19P33204 171 aaKnown RBP4.68□□□□□ -1.66
SPR28YDR218C RRT2P38332 387 aa4.68□□□□□ -1.66
SPR28YDR218C RPP1P38786 293 aa4.68□□□□□ -1.66
SPR28YDR218C TOM71P38825 639 aaKnown RBP4.68□□□□□ -1.66
SPR28YDR218C SAK1P38990 1142 aa4.68□□□□□ -1.66
SPR28YDR218C ALD5P40047 520 aaKnown RBP4.68□□□□□ -1.66
SPR28YDR218C ASG1P40467 964 aa4.68□□□□□ -1.66
SPR28YDR218C MUP1P50276 574 aa4.68□□□□□ -1.66
SPR28YDR218C TWF1P53250 332 aa4.68□□□□□ -1.66
SPR28YDR218C ASI2P53895 289 aa4.68□□□□□ -1.66
SPR28YDR218C RCR2Q03446 210 aaKnown RBP4.68□□□□□ -1.66
SPR28YDR218C DLT1Q04216 342 aa4.68□□□□□ -1.66
SPR28YDR218C MDM36Q06820 579 aa4.68□□□□□ -1.66
SPR28YDR218C AIM6Q07716 390 aa4.68□□□□□ -1.66
SPR28YDR218C BUD7Q08754 746 aa4.68□□□□□ -1.66
SPR28YDR218C SUT2Q12286 268 aa4.68□□□□□ -1.66
SPR28YDR218C AVL9Q12500 764 aa4.68□□□□□ -1.66
SPR28YDR218C YPT6Q99260 215 aa4.68□□□□□ -1.66
SPR28YDR218C RAD61Q99359 647 aa4.68□□□□□ -1.66
SPR28YDR218C YBR085C-AO43137 85 aa4.67□□□□□ -1.66
SPR28YDR218C GCD2P12754 651 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C RPL3P14126 387 aaKnown RBP4.67□□□□□ -1.66
SPR28YDR218C SRV2P17555 526 aaKnown RBP4.67□□□□□ -1.66
SPR28YDR218C ERG6P25087 383 aaKnown RBP4.67□□□□□ -1.66
SPR28YDR218C BUD5P25300 642 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C DMC1P25453 334 aa4.67□□□□□ -1.66
SPR28YDR218C DPH5P32469 300 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C YKT6P36015 200 aaKnown RBP4.67□□□□□ -1.66
SPR28YDR218C TCD1P38756 429 aa4.67□□□□□ -1.66
SPR28YDR218C YTA12P40341 825 aa4.67□□□□□ -1.66
SPR28YDR218C HXT14P42833 540 aa4.67□□□□□ -1.66
SPR28YDR218C LYS4P49367 693 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C CTR1P49573 406 aa4.67□□□□□ -1.66
SPR28YDR218C PRP31P49704 494 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C RRP46P53256 223 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C RHO5P53879 331 aaKnown RBP4.67□□□□□ -1.66
SPR28YDR218C MTG1Q03151 367 aaPredicted RBP4.67□□□□□ -1.66
SPR28YDR218C SOV1Q04748 898 aa4.67□□□□□ -1.66
SPR28YDR218C RRT8Q08219 342 aa4.67□□□□□ -1.66
SPR28YDR218C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
SPR28YDR218C TPK2P06245 380 aa4.66□□□□□ -1.66
SPR28YDR218C CAF20P12962 161 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C YJU2P28320 278 aaPredicted RBP4.66□□□□□ -1.66
SPR28YDR218C PRE4P30657 266 aa4.66□□□□□ -1.66
SPR28YDR218C MCM4P30665 933 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C HMX1P32339 317 aa4.66□□□□□ -1.66
SPR28YDR218C PMT1P33775 817 aa4.66□□□□□ -1.66
SPR28YDR218C NUP60P39705 539 aa4.66□□□□□ -1.66
SPR28YDR218C AIM10P39965 576 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C YER034WP40022 185 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C SEC9P40357 651 aa4.66□□□□□ -1.66
SPR28YDR218C ULP2P40537 1034 aaPredicted RBP4.66□□□□□ -1.66
SPR28YDR218C IME4P41833 600 aa4.66□□□□□ -1.66
SPR28YDR218C IDS2P46958 469 aa4.66□□□□□ -1.66
SPR28YDR218C RMD9P53140 646 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C MPP6P53725 186 aaPredicted RBP4.66□□□□□ -1.66
SPR28YDR218C PRM1P53835 661 aa4.66□□□□□ -1.66
SPR28YDR218C INN1P53901 409 aa4.66□□□□□ -1.66
SPR28YDR218C RPA49Q01080 415 aaPredicted RBP4.66□□□□□ -1.66
SPR28YDR218C SMA1Q02651 245 aa4.66□□□□□ -1.66
SPR28YDR218C ADE13Q05911 482 aaKnown RBP4.66□□□□□ -1.66
SPR28YDR218C MCM21Q06675 368 aa4.66□□□□□ -1.66
SPR28YDR218C MRH1Q12117 320 aaPredicted RBP4.66□□□□□ -1.66
SPR28YDR218C UBX3Q12229 455 aa4.66□□□□□ -1.66
SPR28YDR218C STE2D6VTK4 431 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms