RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	YCL068C	P25593	260 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	YCR061W	P25639	631 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	PEX3	P28795	441 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	SQT1	P35184	431 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	ALY1	P36117	915 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	FMO1	P38866	432 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	SEC72	P39742	193 aa	Known RBP	4.98	□□□□□ -1.61
SNF3	YDL194W	PSF2	P40359	213 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	UFE1	P41834	346 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	BRE2	P43132	505 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	ADE16	P54113	591 aa	Known RBP	4.98	□□□□□ -1.61
SNF3	YDL194W	ROY1	Q04847	553 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	YDR306C	Q06640	478 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	OMS1	Q06668	471 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	HMS1	Q12398	434 aa		4.98	□□□□□ -1.61
SNF3	YDL194W	CHS1	P08004	1131 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	LPD1	P09624	499 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	MATALPHA2	P0CY08	210 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	HMLALPHA2	P0CY09	210 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	PCK1	P10963	549 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	CDC24	P11433	854 aa	Predicted RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	FBA1	P14540	359 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	PHO3	P24031	467 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	CTR86	P25355	563 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	MCM4	P30665	933 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	RPD3	P32561	433 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	PTK1	P36002	662 aa	Predicted RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	UME6	P39001	836 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	JHD1	P40034	492 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	YER186C	P40101	306 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	SLM1	P40485	686 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	PPT1	P53043	513 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	MND1	P53102	219 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	YSA1	Q01976	231 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	PEX12	Q04370	399 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	RDR1	Q08904	546 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	YPL216W	Q08964	1102 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	BMT6	Q12291	365 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	MDM20	Q12387	796 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	FLP1	P03870	423 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	ATP12	P22135	325 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	SIP1	P32578	815 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	NTH2	P35172	780 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	SRP102	P36057	244 aa	Predicted RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	AME1	P38313	324 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	SSH1	P38353	490 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	SOK1	P40317	901 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	RFC4	P40339	323 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	ZPR1	P53303	486 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	BOP3	P53958	396 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	CTF19	Q02732	369 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	SKI8	Q02793	397 aa	Predicted RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	MRP51	Q02950	344 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	ARX1	Q03862	593 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	CTS2	Q06350	511 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	XYL2	Q07993	356 aa		4.97	□□□□□ -1.61
SNF3	YDL194W	NOP12	Q08208	459 aa	Known RBP	4.97	□□□□□ -1.61
SNF3	YDL194W	RAD9	P14737	1309 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	ABF1	P14164	731 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	PTP1	P25044	335 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	GCD11	P32481	527 aa	Known RBP	4.96	□□□□□ -1.62
SNF3	YDL194W	PET10	P36139	283 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	YBR284W	P38150	797 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	YIL001W	P40560	513 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	NUP116	Q02630	1113 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	ENT5	Q03769	411 aa	Known RBP	4.96	□□□□□ -1.62
SNF3	YDL194W	HRQ1	Q05549	1077 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	CSC1	Q06538	782 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	SGO1	Q08490	590 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	MCH5	Q08777	521 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.96	□□□□□ -1.62
SNF3	YDL194W	AFI1	Q99222	893 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	PGK1	P00560	416 aa	Known RBP	4.96	□□□□□ -1.62
SNF3	YDL194W	PHO5	P00635	467 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	BET2	P20133	325 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	RBK1	P25332	333 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	PET18	P25362	215 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	CIN8	P27895	1000 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	TGL1	P34163	548 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SNF3	YDL194W	AIM29	P36154	155 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	FIG1	P38224	298 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	BNA2	P47125	453 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	PSP1	P50896	841 aa	Known RBP	4.96	□□□□□ -1.62
SNF3	YDL194W	RTT102	P53330	157 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	NGL3	Q03210	505 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	YDR222W	Q04925	415 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	HDA2	Q06629	674 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	ATG23	Q06671	453 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	OSW2	Q12202	724 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	YDR262W	Q12331	272 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	YBR126W-A	Q8TGU7	68 aa		4.96	□□□□□ -1.62
SNF3	YDL194W	RAM1	P22007	431 aa		4.95	□□□□□ -1.62
SNF3	YDL194W	MVD1	P32377	396 aa	Known RBP	4.95	□□□□□ -1.62
SNF3	YDL194W	HOG1	P32485	435 aa		4.95	□□□□□ -1.62
SNF3	YDL194W	URA8	P38627	578 aa	Predicted RBP	4.95	□□□□□ -1.62
SNF3	YDL194W	AFG3	P39925	761 aa		4.95	□□□□□ -1.62
SNF3	YDL194W	VAB2	P40003	282 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms