RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C GAS5Q08193 484 aa4.36□□□□□ -1.71
CDC9YDL164C COQ4O13525 335 aa4.35□□□□□ -1.71
CDC9YDL164C JIP3O13555 125 aa4.35□□□□□ -1.71
CDC9YDL164C PCT1P13259 424 aa4.35□□□□□ -1.71
CDC9YDL164C RFA2P26754 273 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C TAT1P38085 619 aa4.35□□□□□ -1.71
CDC9YDL164C KEL1P38853 1164 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C HXT14P42833 540 aa4.35□□□□□ -1.71
CDC9YDL164C CTR1P49573 406 aa4.35□□□□□ -1.71
CDC9YDL164C RIA1P53893 1110 aa4.35□□□□□ -1.71
CDC9YDL164C YDR239CQ03780 787 aa4.35□□□□□ -1.71
CDC9YDL164C ECM7Q06200 448 aa4.35□□□□□ -1.71
CDC9YDL164C MCM21Q06675 368 aa4.35□□□□□ -1.71
CDC9YDL164C SGO1Q08490 590 aa4.35□□□□□ -1.71
CDC9YDL164C Q0010Q9ZZX9 128 aa4.35□□□□□ -1.71
CDC9YDL164C SUP35P05453 685 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C SCH9P11792 824 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C SRP54P20424 541 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C SAG1P20840 650 aa4.35□□□□□ -1.71
CDC9YDL164C SEC62P21825 274 aa4.35□□□□□ -1.71
CDC9YDL164C NTG1P31378 399 aa4.35□□□□□ -1.71
CDC9YDL164C KRE6P32486 720 aa4.35□□□□□ -1.71
CDC9YDL164C KES1P35844 434 aaKnown RBP4.35□□□□□ -1.71
CDC9YDL164C RFC5P38251 354 aa4.35□□□□□ -1.71
CDC9YDL164C COS111P38308 924 aa4.35□□□□□ -1.71
CDC9YDL164C AKR1P39010 764 aa4.35□□□□□ -1.71
CDC9YDL164C REC102Q02721 264 aa4.35□□□□□ -1.71
CDC9YDL164C PPM1Q04081 328 aa4.35□□□□□ -1.71
CDC9YDL164C MRPL1Q04599 285 aa4.35□□□□□ -1.71
CDC9YDL164C YSH1Q06224 779 aaPredicted RBP4.35□□□□□ -1.71
CDC9YDL164C YLR413WQ06689 675 aa4.35□□□□□ -1.71
CDC9YDL164C NUS1Q12063 375 aa4.35□□□□□ -1.71
CDC9YDL164C RRD2Q12461 358 aa4.35□□□□□ -1.71
CDC9YDL164C COX3P00420 269 aa4.34□□□□□ -1.71
CDC9YDL164C CBP2P03874 630 aaPredicted RBP4.34□□□□□ -1.71
CDC9YDL164C YIM1P28625 365 aa4.34□□□□□ -1.71
CDC9YDL164C DPH5P32469 300 aaPredicted RBP4.34□□□□□ -1.71
CDC9YDL164C MRP4P32902 394 aa4.34□□□□□ -1.71
CDC9YDL164C YBL055CP34220 418 aaPredicted RBP4.34□□□□□ -1.71
CDC9YDL164C MNN9P39107 395 aaKnown RBP4.34□□□□□ -1.71
CDC9YDL164C ALD5P40047 520 aaKnown RBP4.34□□□□□ -1.71
CDC9YDL164C YMR147WP40218 223 aaKnown RBP4.34□□□□□ -1.71
CDC9YDL164C NCS6P53088 359 aa4.34□□□□□ -1.71
CDC9YDL164C MTL1P53214 551 aa4.34□□□□□ -1.71
CDC9YDL164C FHN1P53279 174 aa4.34□□□□□ -1.71
CDC9YDL164C SNZ1Q03148 297 aa4.34□□□□□ -1.71
CDC9YDL164C YFT2Q06676 274 aa4.34□□□□□ -1.71
CDC9YDL164C YDL176WQ12027 708 aa4.34□□□□□ -1.71
CDC9YDL164C RUD3Q12234 484 aaKnown RBP4.34□□□□□ -1.71
CDC9YDL164C YLR415CO13578 112 aa4.34□□□□□ -1.72
CDC9YDL164C SPE1P08432 466 aa4.34□□□□□ -1.72
CDC9YDL164C PUT4P15380 627 aa4.34□□□□□ -1.72
CDC9YDL164C PPH22P23595 377 aa4.34□□□□□ -1.72
CDC9YDL164C YIH1P25637 258 aa4.34□□□□□ -1.72
CDC9YDL164C PTK1P36002 662 aaPredicted RBP4.34□□□□□ -1.72
CDC9YDL164C MRPL4P36517 319 aa4.34□□□□□ -1.72
CDC9YDL164C ALG14P38242 237 aa4.34□□□□□ -1.72
CDC9YDL164C MSG5P38590 489 aa4.34□□□□□ -1.72
CDC9YDL164C YHL017WP38745 532 aa4.34□□□□□ -1.72
CDC9YDL164C PEX18P38855 283 aa4.34□□□□□ -1.72
CDC9YDL164C YJL132WP47014 750 aa4.34□□□□□ -1.72
CDC9YDL164C RFX1P48743 811 aa4.34□□□□□ -1.72
CDC9YDL164C TOM22P49334 152 aa4.34□□□□□ -1.72
CDC9YDL164C DCP2P53550 970 aaKnown RBP4.34□□□□□ -1.72
CDC9YDL164C MTG1Q03151 367 aaPredicted RBP4.34□□□□□ -1.72
CDC9YDL164C INP2Q03824 705 aa4.34□□□□□ -1.72
CDC9YDL164C PFK27Q12471 397 aaPredicted RBP4.34□□□□□ -1.72
CDC9YDL164C CBP1P07252 654 aa4.33□□□□□ -1.72
CDC9YDL164C ERG20P08524 352 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C PDB1P32473 366 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C YKL070WP36087 169 aa4.33□□□□□ -1.72
CDC9YDL164C ASC1P38011 319 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C FAD1P38913 306 aa4.33□□□□□ -1.72
CDC9YDL164C SPT8P38915 602 aa4.33□□□□□ -1.72
CDC9YDL164C AIM10P39965 576 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C VID30P53076 958 aa4.33□□□□□ -1.72
CDC9YDL164C YGL138CP53122 345 aa4.33□□□□□ -1.72
CDC9YDL164C PIB2P53191 635 aa4.33□□□□□ -1.72
CDC9YDL164C YGR054WP53235 642 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C ARP5P53946 755 aa4.33□□□□□ -1.72
CDC9YDL164C YPL108WQ02872 168 aaPredicted RBP4.33□□□□□ -1.72
CDC9YDL164C COQ9Q05779 260 aa4.33□□□□□ -1.72
CDC9YDL164C ATG9Q12142 997 aa4.33□□□□□ -1.72
CDC9YDL164C LDB17Q12342 491 aa4.33□□□□□ -1.72
CDC9YDL164C TFB5Q3E7C1 72 aaPredicted RBP4.33□□□□□ -1.72
CDC9YDL164C HXK2P04807 486 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C SPO7P18410 259 aa4.33□□□□□ -1.72
CDC9YDL164C PRE8P23639 250 aa4.33□□□□□ -1.72
CDC9YDL164C APL1P27351 700 aa4.33□□□□□ -1.72
CDC9YDL164C SMY1P32364 656 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C TUL1P36096 758 aa4.33□□□□□ -1.72
CDC9YDL164C PZF1P39933 429 aa4.33□□□□□ -1.72
CDC9YDL164C AIM20P40451 204 aa4.33□□□□□ -1.72
CDC9YDL164C PAN2P53010 1115 aaPredicted RBP4.33□□□□□ -1.72
CDC9YDL164C STR3P53101 465 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C MPS2P53159 387 aa4.33□□□□□ -1.72
CDC9YDL164C LSC1P53598 329 aaKnown RBP4.33□□□□□ -1.72
CDC9YDL164C MSC1Q03104 513 aa4.33□□□□□ -1.72
CDC9YDL164C YMR160WQ03823 816 aa4.33□□□□□ -1.72
CDC9YDL164C PCL8Q08966 492 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms