RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W SNF1P06782 633 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W PRI2P20457 528 aa2.05□□□□□ -2.08
USO1YDL058W NPR1P22211 790 aa2.05□□□□□ -2.08
USO1YDL058W CAD1P24813 409 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W RVS161P25343 265 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W GEX1P25596 615 aa2.05□□□□□ -2.08
USO1YDL058W YCR051WP25631 222 aa2.05□□□□□ -2.08
USO1YDL058W DGR2P32330 852 aa2.05□□□□□ -2.08
USO1YDL058W EUG1P32474 517 aa2.05□□□□□ -2.08
USO1YDL058W HIR1P32479 840 aa2.05□□□□□ -2.08
USO1YDL058W GIP1P38229 639 aa2.05□□□□□ -2.08
USO1YDL058W ZTA1P38230 334 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W SMF1P38925 575 aa2.05□□□□□ -2.08
USO1YDL058W RFC4P40339 323 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W YJL181WP46987 611 aa2.05□□□□□ -2.08
USO1YDL058W YJL007CP47080 104 aa2.05□□□□□ -2.08
USO1YDL058W DAN4P47179 1161 aa2.05□□□□□ -2.08
USO1YDL058W YGR168CP53293 376 aa2.05□□□□□ -2.08
USO1YDL058W YNR068CP53754 272 aa2.05□□□□□ -2.08
USO1YDL058W ARG5,6Q01217 863 aa2.05□□□□□ -2.08
USO1YDL058W YPL077CQ02831 240 aa2.05□□□□□ -2.08
USO1YDL058W YMR114CQ04471 368 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W GFD1Q04839 188 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W YPR084WQ06821 456 aa2.05□□□□□ -2.08
USO1YDL058W MED7Q08278 222 aa2.05□□□□□ -2.08
USO1YDL058W RIM20Q12033 661 aa2.05□□□□□ -2.08
USO1YDL058W ACF2Q12168 779 aa2.05□□□□□ -2.08
USO1YDL058W YAH1Q12184 172 aaKnown RBP2.05□□□□□ -2.08
USO1YDL058W RDI1Q12434 202 aa2.05□□□□□ -2.08
USO1YDL058W ENO1P00924 437 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W RPL25P04456 142 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W MSS18P08593 268 aa2.04□□□□□ -2.08
USO1YDL058W FUS1P11710 512 aa2.04□□□□□ -2.08
USO1YDL058W GCN3P14741 305 aa2.04□□□□□ -2.08
USO1YDL058W VAC17P25591 423 aa2.04□□□□□ -2.08
USO1YDL058W ECM32P32644 1121 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W RPT5P33297 434 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W TIP20P33891 701 aa2.04□□□□□ -2.08
USO1YDL058W LOT5P34234 306 aa2.04□□□□□ -2.08
USO1YDL058W HES1P35843 434 aa2.04□□□□□ -2.08
USO1YDL058W EAF5P39995 279 aa2.04□□□□□ -2.08
USO1YDL058W MAM1P40065 302 aa2.04□□□□□ -2.08
USO1YDL058W QDR1P40475 563 aa2.04□□□□□ -2.08
USO1YDL058W SNX4P47057 423 aa2.04□□□□□ -2.08
USO1YDL058W EAF6P47128 113 aa2.04□□□□□ -2.08
USO1YDL058W PAN2P53010 1115 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W YGR250CP53316 781 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W GPD1Q00055 391 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W SHR3Q02774 210 aa2.04□□□□□ -2.08
USO1YDL058W SCS7Q03529 384 aa2.04□□□□□ -2.08
USO1YDL058W ECM38Q05902 660 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W EST2Q06163 884 aa2.04□□□□□ -2.08
USO1YDL058W YDL129WQ07555 291 aa2.04□□□□□ -2.08
USO1YDL058W YOR365CQ08844 703 aa2.04□□□□□ -2.08
USO1YDL058W TIP41Q12199 356 aa2.04□□□□□ -2.08
USO1YDL058W BMT6Q12291 365 aa2.04□□□□□ -2.08
USO1YDL058W RKM5Q12367 367 aa2.04□□□□□ -2.08
USO1YDL058W TRM13Q12383 476 aa2.04□□□□□ -2.08
USO1YDL058W PAA1Q12447 191 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W MEX67Q99257 599 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W CHD1P32657 1468 aa2.04□□□□□ -2.08
USO1YDL058W NTE1Q04958 1679 aa2.04□□□□□ -2.08
USO1YDL058W THP2O13539 261 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W GAL7P08431 366 aa2.04□□□□□ -2.08
USO1YDL058W KRS1P15180 591 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ANB1P19211 157 aa2.04□□□□□ -2.08
USO1YDL058W COX11P19516 300 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W PDC6P26263 563 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W KTR1P27810 393 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W SEC61P32915 480 aa2.04□□□□□ -2.08
USO1YDL058W SUR1P33300 382 aa2.04□□□□□ -2.08
USO1YDL058W KAE1P36132 386 aa2.04□□□□□ -2.08
USO1YDL058W SIF2P38262 535 aa2.04□□□□□ -2.08
USO1YDL058W YPT31P38555 223 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W YHL017WP38745 532 aa2.04□□□□□ -2.08
USO1YDL058W ICP55P40051 511 aa2.04□□□□□ -2.08
USO1YDL058W ATM1P40416 690 aa2.04□□□□□ -2.08
USO1YDL058W PFK26P40433 827 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W JJJ2P46997 583 aa2.04□□□□□ -2.08
USO1YDL058W MNN10P50108 393 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ARC35P53731 342 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W VTI1Q04338 217 aa2.04□□□□□ -2.08
USO1YDL058W YLR345WQ06137 509 aa2.04□□□□□ -2.08
USO1YDL058W PDR8Q06149 701 aa2.04□□□□□ -2.08
USO1YDL058W MSH5Q12175 901 aa2.04□□□□□ -2.08
USO1YDL058W NCR1Q12200 1170 aa2.04□□□□□ -2.08
USO1YDL058W YDR461C-AQ2V2P7 80 aa2.04□□□□□ -2.08
USO1YDL058W HSH49Q99181 213 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W SCC2Q04002 1493 aa2.04□□□□□ -2.08
USO1YDL058W RAD3P06839 778 aa2.04□□□□□ -2.08
USO1YDL058W ERG12P07277 443 aa2.04□□□□□ -2.08
USO1YDL058W FBA1P14540 359 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W GFA1P14742 717 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W APL1P27351 700 aa2.04□□□□□ -2.08
USO1YDL058W CDC13P32797 924 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W VPS17P32913 551 aa2.04□□□□□ -2.08
USO1YDL058W HCS1P34243 683 aa2.04□□□□□ -2.08
USO1YDL058W SET3P36124 751 aa2.04□□□□□ -2.08
USO1YDL058W DUG2P38149 878 aa2.04□□□□□ -2.08
USO1YDL058W MAP2P38174 421 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms