RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	CSE1	P33307	960 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	CTF13	P35203	478 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	HEL1	P36113	551 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	VPS51	P36116	164 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	APM3	P38153	483 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	PCM1	P38628	557 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	KSP1	P38691	1029 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	LIN1	P38852	340 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	YHR182W	P38870	785 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SUR2	P38992	349 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	STT3	P39007	718 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	FLC2	P39719	783 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	PZF1	P39933	429 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	YER010C	P40011	234 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	RTR1	P40084	226 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	SCC4	P40090	624 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	EFM4	P40516	257 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	ULP2	P40537	1034 aa	Predicted RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	YFL052W	P43551	465 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	RMR1	P53060	241 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	DSD1	P53095	428 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	PDR16	P53860	351 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	IPI3	P53877	555 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	MAK10	Q02197	733 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	NHX1	Q04121	633 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SPC24	Q04477	213 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	ATG33	Q06485	197 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	GUD1	Q07729	489 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	SPE3	Q12074	293 aa	Known RBP	4.19	□□□□□ -1.74
HCM1	YCR065W	ACF2	Q12168	779 aa		4.19	□□□□□ -1.74
HCM1	YCR065W	GCN4	P03069	281 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	GUK1	P15454	187 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	HOP1	P20050	605 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	DPB2	P24482	689 aa	Predicted RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	HXT1	P32465	570 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	RPT3	P33298	428 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	APE3	P37302	537 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	ADH5	P38113	351 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	KAP104	P38217	918 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	MED8	P38304	223 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	RPP1	P38786	293 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	RPN10	P38886	268 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	ALK1	P43633	760 aa	Known RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	MPS2	P53159	387 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	CUL3	P53202	744 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	REG1	Q00816	1014 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	MRPL13	Q02204	264 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	ECM22	Q05958	814 aa	Predicted RBP	4.18	□□□□□ -1.74
HCM1	YCR065W	YDL109C	Q12103	647 aa		4.18	□□□□□ -1.74
HCM1	YCR065W	BUD4	P47136	1447 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
HCM1	YCR065W	GPA1	P08539	472 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	UTR1	P21373	530 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	CLB1	P24868	471 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	CLB4	P24871	460 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	ALB1	P47019	175 aa	Predicted RBP	4.17	□□□□□ -1.74
HCM1	YCR065W	MDV1	P47025	714 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	MTR3	P48240	250 aa	Predicted RBP	4.17	□□□□□ -1.74
HCM1	YCR065W	CAF130	P53280	1122 aa	Predicted RBP	4.17	□□□□□ -1.74
HCM1	YCR065W	COQ6	P53318	479 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	KIN4	Q01919	800 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	ABZ2	Q03266	374 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	HLR1	Q04429	423 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	GTO3	Q04806	366 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	ECM38	Q05902	660 aa	Predicted RBP	4.17	□□□□□ -1.74
HCM1	YCR065W	VPS38	Q05919	439 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	MMR1	Q06324	491 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	TRM11	Q12463	433 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	RAD50	P12753	1312 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	TUS1	Q06412	1307 aa		4.17	□□□□□ -1.74
HCM1	YCR065W	TCP1	P12612	559 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	RSR1	P13856	272 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
HCM1	YCR065W	YCL049C	P25577	312 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	CPR5	P35176	225 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	STB6	P36085	766 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	GLG1	P36143	616 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	VMA22	P38784	181 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	PPE1	P38796	400 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	REV7	P38927	245 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	EDC3	P39998	551 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	THO1	P40040	218 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	MPS3	P47069	682 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	BNA2	P47125	453 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	MPP6	P53725	186 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	FYV6	P53913	173 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	ARP4	P80428	489 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	SKY1	Q03656	742 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	ATC1	Q04005	294 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	TFC6	Q06339	672 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	LUC7	Q07508	261 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SNA4	Q07549	140 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	TCO89	Q08921	799 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	GPM3	Q12326	303 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	TRP4	P07285	380 aa	Predicted RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SEC62	P21825	274 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	GID7	P25569	745 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	GEX1	P25596	615 aa		4.16	□□□□□ -1.74
HCM1	YCR065W	HRR25	P29295	494 aa	Known RBP	4.16	□□□□□ -1.74
HCM1	YCR065W	SAC6	P32599	642 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms