RNA–Protein interactions for RNA: YBR187W

GDT1, Transcript of Protein of unknown function involved in calcium homeostasis, yeast

Gene GDT1, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDT1	YBR187W	YSC83	P32792	385 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	HSP78	P33416	811 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	YBL055C	P34220	418 aa	Predicted RBP	4.17	□□□□□ -1.74
GDT1	YBR187W	ECM13	P38195	257 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	YBR032W	P38223	100 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	YHR210C	P38893	341 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	AXL1	P40851	1208 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	SEC26	P41810	973 aa	Known RBP	4.17	□□□□□ -1.74
GDT1	YBR187W	BPL1	P48445	690 aa	Predicted RBP	4.17	□□□□□ -1.74
GDT1	YBR187W	ZIP2	P53061	704 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	YGR111W	P53265	400 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	TRM112	P53738	135 aa	Predicted RBP	4.17	□□□□□ -1.74
GDT1	YBR187W	EGD1	Q02642	157 aa	Known RBP	4.17	□□□□□ -1.74
GDT1	YBR187W	YCS4	Q06156	1176 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	YLL054C	Q12244	843 aa		4.17	□□□□□ -1.74
GDT1	YBR187W	GCR1	P07261	785 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	CHS1	P08004	1131 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	GCD2	P12754	651 aa	Predicted RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	PMS1	P14242	873 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	URA4	P20051	364 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	PWP1	P21304	576 aa	Known RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	VMA4	P22203	233 aa	Known RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	CLB4	P24871	460 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	RNQ1	P25367	405 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	CDC11	P32458	415 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	CBF2	P32504	956 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	ZUO1	P32527	433 aa	Known RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	RIP-Chip
GDT1	YBR187W	YME2	P32843	850 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
GDT1	YBR187W	SET3	P36124	751 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	FZO1	P38297	855 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	HSM3	P38348	480 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	REV7	P38927	245 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	YMR134W	P40207	237 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	YIL001W	P40560	513 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	MDJ2	P42834	146 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	BNA3	P47039	444 aa	Known RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	ERP6	P53198	216 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	YNL144C	P53907	740 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	ERV41	Q04651	352 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	YDR222W	Q04925	415 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	RSF1	Q05043	376 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	OSW1	Q08692	278 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	GPN2	Q08726	347 aa	Predicted RBP	4.16	□□□□□ -1.74
GDT1	YBR187W	NBP2	Q12163	236 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	YDR262W	Q12331	272 aa		4.16	□□□□□ -1.74
GDT1	YBR187W	STT4	P37297	1900 aa		4.15	□□□□□ -1.74
GDT1	YBR187W	CYC7	P00045	113 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	RPS3	P05750	240 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	ILS1	P09436	1072 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	PDA1	P16387	420 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	CBF1	P17106	351 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	ERS1	P17261	260 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	DAL2	P25335	343 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	TPS2	P31688	896 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	CDC3	P32457	520 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	SSE1	P32589	693 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	MUD1	P32605	298 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	MRE11	P32829	692 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	PMT1	P33775	817 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	POP4	P38336	279 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	PMC1	P38929	1173 aa	Predicted RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	ZIM17	P42844	174 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	UBP6	P43593	499 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	ASK10	P48361	1146 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	TAF6	P53040	516 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	PCL10	P53124	433 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	VPS73	P53142	486 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	SPO19	Q03029	223 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	YMR027W	Q04371	470 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	GTB1	Q04924	702 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	GIC2	Q06648	383 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	MDM38	Q08179	573 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	ABP140	Q08641	628 aa	Known RBP	4.15	□□□□□ -1.75
GDT1	YBR187W	RSA1	Q08932	381 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	YPR027C	Q12079	277 aa		4.15	□□□□□ -1.75
GDT1	YBR187W	BCY1	P07278	416 aa	Known RBP	4.14	□□□□□ -1.75
GDT1	YBR187W	HOP1	P20050	605 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	NPR1	P22211	790 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	SGV1	P23293	657 aa	Known RBP	4.14	□□□□□ -1.75
GDT1	YBR187W	EFB1	P32471	206 aa	Known RBP	4.14	□□□□□ -1.75
GDT1	YBR187W	TOA1	P32773	286 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	RIM11	P38615	370 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	RFC3	P38629	340 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	YHR020W	P38708	688 aa	Known RBP	4.14	□□□□□ -1.75
GDT1	YBR187W	ERP5	P38819	212 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	SPC97	P38863	823 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	ELP2	P42935	788 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	DAS1	P47005	663 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	GCV1	P48015	400 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	SHE10	P53075	577 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	NOG2	P53742	486 aa	Known RBP	4.14	□□□□□ -1.75
GDT1	YBR187W	COG6	P53959	839 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	CDC55	Q00362	526 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	MSH6	Q03834	1242 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	HFD1	Q04458	532 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	FAR10	Q06001	478 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	BRE4	Q07660	1125 aa		4.14	□□□□□ -1.75
GDT1	YBR187W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms