RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	PHO12	P38693	467 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	SNF12	P53628	566 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	RPL6A	Q02326	176 aa	Known RBP	5.07	□□□□□ -1.6
SMP1	YBR182C	YDR109C	Q04585	715 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	MLH2	Q07980	695 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	CFT2	Q12102	859 aa	Predicted RBP	5.07	□□□□□ -1.6
SMP1	YBR182C	NTO1	Q12311	748 aa		5.07	□□□□□ -1.6
SMP1	YBR182C	HXK2	P04807	486 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	RPL1A	P0CX43	217 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	RPL1B	P0CX44	217 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	YPK1	P12688	680 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	SSE2	P32590	693 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	HES1	P35843	434 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	NTR2	P36118	322 aa	Predicted RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	AAP1	P37898	856 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	APL3	P38065	1025 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	DIA4	P38705	446 aa	Predicted RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	SEC31	P38968	1273 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	LAS21	P40367	830 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	VMA13	P41807	478 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	SWP82	P43554	623 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	RPS7B	P48164	190 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	MSY1	P48527	492 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	IMD4	P50094	524 aa	Known RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	DIA3	P52290	468 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	DIP5	P53388	608 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	SUN4	P53616	420 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	YMR111C	Q04461	462 aa	Predicted RBP	5.06	□□□□□ -1.6
SMP1	YBR182C	RLM1	Q12224	676 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	TAD3	Q9URQ3	322 aa		5.06	□□□□□ -1.6
SMP1	YBR182C	COX1	P00401	534 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	SIR3	P06701	978 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	PRD1	P25375	712 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	BUD14	P27637	709 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	YEL043W	P32618	956 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	YME2	P32843	850 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	SOF1	P33750	489 aa	Known RBP	5.05	□□□□□ -1.6
SMP1	YBR182C	YBR144C	P34215	104 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	RRT2	P38332	387 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	WSS1	P38838	269 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	MRX1	P40050	688 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	RTT105	P40063	208 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	FAR3	P46671	204 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	BUD17	P53727	317 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	IST1	P53843	298 aa	Predicted RBP	5.05	□□□□□ -1.6
SMP1	YBR182C	IPI3	P53877	555 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	MGR3	Q04472	501 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	UFO1	Q04511	668 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	HEL2	Q05580	639 aa	Known RBP	5.05	□□□□□ -1.6
SMP1	YBR182C	CRT10	Q08226	957 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	IRC13	Q08630	104 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	MLH3	Q12083	715 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	AI5_ALPHA	Q9ZZX1	630 aa		5.05	□□□□□ -1.6
SMP1	YBR182C	TPK2	P06245	380 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	CNE1	P27825	502 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	LHS1	P36016	881 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YHR218W	P38899	603 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	UIP3	P39547	235 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	FMP52	P40008	231 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	NPA3	P47122	385 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	PHO23	P50947	330 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YIP4	P53093	235 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YGR127W	P53275	312 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YGR151C	P53287	111 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YNL058C	P53947	316 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	EFM6	P53970	246 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YDL242W	Q07746	117 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	VPS54	Q12071	889 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	PSY3	Q12318	242 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	AAC1	P04710	309 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	YSP3	P25036	478 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	LAC1	P28496	418 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	HXT3	P32466	567 aa	Known RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	RML2	P32611	393 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	TIF3	P34167	436 aa	Known RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	MNN2	P38069	597 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	NTC20	P38302	140 aa	Predicted RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	MUP3	P38734	546 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	MTG2	P38860	518 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	NAS2	P40555	220 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	FET5	P43561	622 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	RPN11	P43588	306 aa	Known RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	YJL163C	P46996	555 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	DPB11	P47027	764 aa	Predicted RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	MLC1	P53141	149 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
SMP1	YBR182C	RPS15	Q01855	142 aa	Known RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	UBP16	Q02863	499 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	RBS1	Q05672	457 aa	Known RBP	5.04	□□□□□ -1.6
SMP1	YBR182C	SPH1	Q06160	661 aa		5.04	□□□□□ -1.6
SMP1	YBR182C	CHO2	P05374	869 aa	Known RBP	5.03	□□□□□ -1.6
SMP1	YBR182C	HIP1	P06775	603 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	SRP54	P20424	541 aa	Known RBP	5.03	□□□□□ -1.6
SMP1	YBR182C	SPE2	P21182	396 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	DAL80	P26343	269 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	YME1	P32795	747 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	SLM4	P38247	162 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	STB2	P46679	850 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	URB2	P47108	1174 aa		5.03	□□□□□ -1.6
SMP1	YBR182C	ADE16	P54113	591 aa	Known RBP	5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms