RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W MET3P08536 511 aa3□□□□□ -1.93
SWD3YBR175W RPL1AP0CX43 217 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W RPL1BP0CX44 217 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W CLC1P17891 233 aa3□□□□□ -1.93
SWD3YBR175W VMA16P23968 213 aa3□□□□□ -1.93
SWD3YBR175W MVD1P32377 396 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W MSS1P32559 526 aaPredicted RBP3□□□□□ -1.93
SWD3YBR175W SSE1P32589 693 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W MRE11P32829 692 aa3□□□□□ -1.93
SWD3YBR175W PPQ1P32945 549 aa3□□□□□ -1.93
SWD3YBR175W SUR1P33300 382 aa3□□□□□ -1.93
SWD3YBR175W WBP1P33767 430 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W TCD2P36101 447 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W MNN2P38069 597 aa3□□□□□ -1.93
SWD3YBR175W PCH2P38126 564 aa3□□□□□ -1.93
SWD3YBR175W YSW1P38280 609 aa3□□□□□ -1.93
SWD3YBR175W SDH8P38345 138 aa3□□□□□ -1.93
SWD3YBR175W SUL1P38359 859 aa3□□□□□ -1.93
SWD3YBR175W YNG2P38806 282 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W MTG2P38860 518 aa3□□□□□ -1.93
SWD3YBR175W VPS41P38959 992 aa3□□□□□ -1.93
SWD3YBR175W PKP1P40530 394 aa3□□□□□ -1.93
SWD3YBR175W RPS7BP48164 190 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W IMD4P50094 524 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W SHE4P51534 789 aa3□□□□□ -1.93
SWD3YBR175W ALT2P52892 507 aa3□□□□□ -1.93
SWD3YBR175W MNP1P53163 194 aaPredicted RBP3□□□□□ -1.93
SWD3YBR175W FHN1P53279 174 aa3□□□□□ -1.93
SWD3YBR175W PDR16P53860 351 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W BOP3P53958 396 aa3□□□□□ -1.93
SWD3YBR175W YAT1P80235 687 aa3□□□□□ -1.93
SWD3YBR175W MAK10Q02197 733 aa3□□□□□ -1.93
SWD3YBR175W RPC11Q04307 110 aaPredicted RBP3□□□□□ -1.93
SWD3YBR175W MGR3Q04472 501 aa3□□□□□ -1.93
SWD3YBR175W RBS1Q05672 457 aaKnown RBP3□□□□□ -1.93
SWD3YBR175W CRN1Q06440 651 aa3□□□□□ -1.93
SWD3YBR175W SWA2Q06677 668 aa3□□□□□ -1.93
SWD3YBR175W DCI1Q08558 271 aa3□□□□□ -1.93
SWD3YBR175W FMP40Q08968 688 aaPredicted RBP3□□□□□ -1.93
SWD3YBR175W CFT2Q12102 859 aaPredicted RBP3□□□□□ -1.93
SWD3YBR175W RLM1Q12224 676 aa3□□□□□ -1.93
SWD3YBR175W YER175W-AQ8TGU4 54 aa3□□□□□ -1.93
SWD3YBR175W SGS1P35187 1447 aa3□□□□□ -1.93
SWD3YBR175W YMR084WA2P2R3 262 aa2.99□□□□□ -1.93
SWD3YBR175W MF(ALPHA)1P01149 165 aa2.99□□□□□ -1.93
SWD3YBR175W ALG7P07286 448 aa2.99□□□□□ -1.93
SWD3YBR175W DAP2P18962 818 aa2.99□□□□□ -1.93
SWD3YBR175W SNT1P25357 1226 aa2.99□□□□□ -1.93
SWD3YBR175W RRP43P25359 394 aaPredicted RBP2.99□□□□□ -1.93
SWD3YBR175W DAL80P26343 269 aa2.99□□□□□ -1.93
SWD3YBR175W NTH1P32356 751 aa2.99□□□□□ -1.93
SWD3YBR175W HXT3P32466 567 aaKnown RBP2.99□□□□□ -1.93
SWD3YBR175W NIP1P32497 812 aaKnown RBP2.99□□□□□ -1.93
SWD3YBR175W YME2P32843 850 aa2.99□□□□□ -1.93
SWD3YBR175W SEC66P33754 206 aa2.99□□□□□ -1.93
SWD3YBR175W OAR1P35731 278 aa2.99□□□□□ -1.93
SWD3YBR175W SLM4P38247 162 aa2.99□□□□□ -1.93
SWD3YBR175W LNP1P38878 278 aa2.99□□□□□ -1.93
SWD3YBR175W MRX1P40050 688 aa2.99□□□□□ -1.93
SWD3YBR175W ELO3P40319 345 aa2.99□□□□□ -1.93
SWD3YBR175W ALG5P40350 334 aa2.99□□□□□ -1.93
SWD3YBR175W YIR042CP40586 236 aa2.99□□□□□ -1.93
SWD3YBR175W SWP82P43554 623 aa2.99□□□□□ -1.93
SWD3YBR175W MPS3P47069 682 aa2.99□□□□□ -1.93
SWD3YBR175W RIA1P53893 1110 aa2.99□□□□□ -1.93
SWD3YBR175W ALF1P53904 254 aa2.99□□□□□ -1.93
SWD3YBR175W RSM28Q03430 361 aa2.99□□□□□ -1.93
SWD3YBR175W VTA1Q06263 330 aa2.99□□□□□ -1.93
SWD3YBR175W PHO92Q06390 306 aa2.99□□□□□ -1.93
SWD3YBR175W YLH47Q06493 454 aa2.99□□□□□ -1.93
SWD3YBR175W NOP6Q07623 225 aaKnown RBP2.99□□□□□ -1.93
SWD3YBR175W IZH3Q07959 543 aa2.99□□□□□ -1.93
SWD3YBR175W RTC5Q12108 567 aaKnown RBP2.99□□□□□ -1.93
SWD3YBR175W HER1Q12276 1246 aa2.99□□□□□ -1.93
SWD3YBR175W LPD1P09624 499 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W PDA1P16387 420 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W APN1P22936 367 aa2.98□□□□□ -1.93
SWD3YBR175W GRR1P24814 1151 aa2.98□□□□□ -1.93
SWD3YBR175W YSP3P25036 478 aa2.98□□□□□ -1.93
SWD3YBR175W PRD1P25375 712 aa2.98□□□□□ -1.93
SWD3YBR175W IME2P32581 645 aa2.98□□□□□ -1.93
SWD3YBR175W RML2P32611 393 aa2.98□□□□□ -1.93
SWD3YBR175W TIF3P34167 436 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W HCS1P34243 683 aa2.98□□□□□ -1.93
SWD3YBR175W MOH1P38191 138 aa2.98□□□□□ -1.93
SWD3YBR175W YHR131CP38835 850 aa2.98□□□□□ -1.93
SWD3YBR175W WSS1P38838 269 aa2.98□□□□□ -1.93
SWD3YBR175W HRB1P38922 454 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SWD3YBR175W SEC31P38968 1273 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W FUN12P39730 1002 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W BUR6P40096 142 aa2.98□□□□□ -1.93
SWD3YBR175W SEC27P41811 889 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W STU2P46675 888 aa2.98□□□□□ -1.93
SWD3YBR175W IRC8P47046 822 aa2.98□□□□□ -1.93
SWD3YBR175W CUE3P53137 624 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W SPC98P53540 846 aa2.98□□□□□ -1.93
SWD3YBR175W IPI3P53877 555 aa2.98□□□□□ -1.93
SWD3YBR175W RHO5P53879 331 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W DAK1P54838 584 aaKnown RBP2.98□□□□□ -1.93
SWD3YBR175W RAD33Q04231 177 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms