RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 NPY5RQ15761 445 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 TEKT1Q969V4 418 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 TDRD3Q9H7E2 651 aaKnown RBP16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 TNNI2P48788 182 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 FBXO38Q6PIJ6 1188 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 SERPINB13Q9UIV8 391 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 CAVIN2O95810 425 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 PPP4CP60510 307 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 UBE2SQ16763 222 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 GPIHBP1Q8IV16 184 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 MASTLQ96GX5 879 aa16.59■□□□□ 0.25
TRAFD1-201ENST00000257604 CHD4Q14839 1912 aa16.58■□□□□ 0.25
TRAFD1-201ENST00000257604 FGRP09769 529 aa16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 TXKP42681 527 aa16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 NUP88Q99567 741 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 SFPQP23246 707 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 UBA7P41226 1012 aa16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 CRKP46108 304 aa16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
TRAFD1-201ENST00000257604 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 POLR3GO15318 223 aaPredicted RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 PPIP5K2O43314 1243 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 CCT6AP40227 531 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 STAT6P42226 847 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 TECP42680 631 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 NCAPHQ15003 741 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 PCDHA4Q9UN74 947 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 ECE2O60344 883 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 CUL4BQ13620 913 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 GRM4Q14833 912 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 IL17AQ16552 155 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 C16orf86Q6ZW13 317 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 PAGE5Q96GU1 130 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 VEZTQ9HBM0 779 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 CCZ1BP86790 482 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 CCZ1P86791 482 aaPredicted RBP16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 DTHD1Q6ZMT9 781 aa16.57■□□□□ 0.24
TRAFD1-201ENST00000257604 LAMB2P55268 1798 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 DUOX1Q9NRD9 1551 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 SSBP05455 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 CALML3P27482 149 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 ZNF772Q68DY9 489 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 MTA3Q9BTC8 594 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 CTNND2Q9UQB3 1225 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 TOP1P11387 765 aaKnown RBP16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 USH1GQ495M9 461 aa16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.56■□□□□ 0.24
TRAFD1-201ENST00000257604 DDTLA6NHG4 134 aaPredicted RBP16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 GNAQP50148 359 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 TXLNAP40222 546 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 CCAR2Q8N163 923 aaKnown RBP16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 TBCKQ8TEA7 893 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 MRFAP1L1Q96HT8 127 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 DOCK2Q92608 1830 aa16.55■□□□□ 0.24
TRAFD1-201ENST00000257604 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 GDAQ9Y2T3 454 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 NYAP1Q6ZVC0 841 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 PDS5AQ29RF7 1337 aaKnown RBP16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 STXBP3O00186 592 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 RCAN1P53805 252 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 RAD51AP2Q09MP3 1159 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 MTMR4Q9NYA4 1195 aa16.54■□□□□ 0.24
TRAFD1-201ENST00000257604 APOBEC3HQ6NTF7 200 aaKnown RBP16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 TRMT1LQ7Z2T5 733 aaKnown RBP16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms