RNA–Protein interactions for RNA: YPR112C

MRD1, Transcript of Essential conserved small ribosomal subunit (40s) synthesis factor, yeast

Gene MRD1, Length 2,664 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRD1	YPR112C	CCT7	P42943	550 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	YFL054C	P43549	646 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	RMD8	P43620	662 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	ARC1	P46672	376 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	CLA4	P48562	842 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	PAN2	P53010	1115 aa	Predicted RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	TEL2	P53038	688 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	NMA2	P53204	395 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	ART5	P53244	586 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	ARE2	P53629	642 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	RCF2	P53721	224 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	VPS9	P54787	451 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	IVY1	Q04934	453 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	SNX3	Q08826	162 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
MRD1	YPR112C	ADF1	Q2V2Q1	113 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	DIF1	O13577	133 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	CTT1	P06115	562 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	RPC40	P07703	335 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	SSC1	P0CS90	654 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	HMG1	P12683	1054 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	NCP1	P16603	691 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	CNA1	P23287	553 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	TPS2	P31688	896 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	PAH1	P32567	862 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	MDL1	P33310	695 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	DHR2	P36009	735 aa	Predicted RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	STV1	P37296	890 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	YBL028C	P38202	106 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	CST26	P38226	397 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	UTP9	P38882	575 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	ASG1	P40467	964 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	MET18	P40469	1032 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	LCB2	P40970	561 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	STB1	P42845	420 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	YGR054W	P53235	642 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	DRN1	P53255	507 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	GPD1	Q00055	391 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	OSH6	Q02201	448 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	YDR179W-A	Q03983	463 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	UFO1	Q04511	668 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	YDR222W	Q04925	415 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	YMR226C	Q05016	267 aa	Known RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	TRE1	Q08919	783 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	SMF3	Q12078	473 aa	Predicted RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	YLL054C	Q12244	843 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	GPR1	Q12361	961 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
MRD1	YPR112C	NOT5	Q12514	560 aa	Predicted RBP	2.6	□□□□□ -1.99
MRD1	YPR112C	APM4	Q99186	491 aa		2.6	□□□□□ -1.99
MRD1	YPR112C	BI4	P03879	638 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	SEC53	P07283	254 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	TCP1	P12612	559 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	VMA2	P16140	517 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	PDX1	P16451	410 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	GLK1	P17709	500 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	AAC3	P18238	307 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	AMS1	P22855	1083 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	PHO3	P24031	467 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	URA7	P28274	579 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	GPI10	P30777	616 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	DUG2	P38149	878 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	PCF11	P39081	626 aa	Predicted RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	FTR1	P40088	404 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	LSM5	P40089	93 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	PFK26	P40433	827 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	NEO1	P40527	1151 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	FAR3	P46671	204 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	NUP84	P52891	726 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	PPT1	P53043	513 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	LSG1	P53145	640 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	NOG2	P53742	486 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	ARP4	P80428	489 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	RPA49	Q01080	415 aa	Predicted RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	YDR476C	Q03362	224 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	ARR1	Q06596	294 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	ESC8	Q08119	714 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	YPR202W	Q08993	238 aa		2.59	□□□□□ -1.99
MRD1	YPR112C	RPS21B	Q3E754	87 aa	Known RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	BRR1	Q99177	341 aa	Predicted RBP	2.59	□□□□□ -1.99
MRD1	YPR112C	TUB2	P02557	457 aa	Known RBP	2.59	□□□□□ -2
MRD1	YPR112C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
MRD1	YPR112C	PMA1	P05030	918 aa	Known RBP	2.59	□□□□□ -2
MRD1	YPR112C	GPA2	P10823	449 aa		2.59	□□□□□ -2
MRD1	YPR112C	CDC24	P11433	854 aa	Predicted RBP	2.59	□□□□□ -2
MRD1	YPR112C	HOP1	P20050	605 aa		2.59	□□□□□ -2
MRD1	YPR112C	GRR1	P24814	1151 aa		2.59	□□□□□ -2
MRD1	YPR112C	SNT1	P25357	1226 aa		2.59	□□□□□ -2
MRD1	YPR112C	POL4	P25615	582 aa		2.59	□□□□□ -2
MRD1	YPR112C	RAD14	P28519	371 aa		2.59	□□□□□ -2
MRD1	YPR112C	ZIP1	P31111	875 aa		2.59	□□□□□ -2
MRD1	YPR112C	CDC12	P32468	407 aa	Known RBP	2.59	□□□□□ -2
MRD1	YPR112C	SMI1	P32566	505 aa		2.59	□□□□□ -2
MRD1	YPR112C	YSC83	P32792	385 aa		2.59	□□□□□ -2
MRD1	YPR112C	ATG19	P35193	415 aa		2.59	□□□□□ -2
MRD1	YPR112C	CSG2	P35206	410 aa		2.59	□□□□□ -2
MRD1	YPR112C	EMC3	P36039	253 aa		2.59	□□□□□ -2
MRD1	YPR112C	ETR1	P38071	380 aa		2.59	□□□□□ -2
MRD1	YPR112C	FTH1	P38310	465 aa		2.59	□□□□□ -2
MRD1	YPR112C	YBP1	P38315	674 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms