RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	YML131W	Q03102	365 aa		4.28	□□□□□ -1.72
TAF3	YPL011C	FCP1	Q03254	732 aa		4.28	□□□□□ -1.72
TAF3	YPL011C	ECM16	Q04217	1267 aa	Known RBP	4.28	□□□□□ -1.72
TAF3	YPL011C	ECI1	Q05871	280 aa		4.28	□□□□□ -1.72
TAF3	YPL011C	YLR302C	O13544	120 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	RAP1	P11938	827 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	MRP20	P32387	263 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	SLC1	P33333	303 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	SEC24	P40482	926 aa	Known RBP	4.27	□□□□□ -1.73
TAF3	YPL011C	IME4	P41833	600 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	PIL1	P53252	339 aa	Known RBP	4.27	□□□□□ -1.73
TAF3	YPL011C	YTP1	P53584	459 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	ESBP6	P53918	673 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	SNO4	Q04902	237 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	HSP33	Q08914	237 aa	Known RBP	4.27	□□□□□ -1.73
TAF3	YPL011C	HSP32	Q08992	237 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	NUS1	Q12063	375 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	ATG9	Q12142	997 aa		4.27	□□□□□ -1.73
TAF3	YPL011C	CBP1	P07252	654 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	RRN3	P36070	627 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	ESL2	P36168	1195 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	ARP1	P38696	384 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	IML2	P47031	731 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	IST1	P53843	298 aa	Predicted RBP	4.26	□□□□□ -1.73
TAF3	YPL011C	ARP10	Q04549	284 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	YOL159C	Q08300	171 aa		4.26	□□□□□ -1.73
TAF3	YPL011C	TRX2	P22803	104 aa	Known RBP	4.25	□□□□□ -1.73
TAF3	YPL011C	CDC15	P27636	974 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	MET30	P39014	640 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	SLZ1	P40167	298 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	PKP1	P40530	394 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	MEP2	P41948	499 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	SCS3	P53012	380 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	INN1	P53901	409 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	INA17	Q02888	182 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	MUB1	Q03162	620 aa		4.25	□□□□□ -1.73
TAF3	YPL011C	UTP21	Q06078	939 aa	Predicted RBP	4.25	□□□□□ -1.73
TAF3	YPL011C	KRS1	P15180	591 aa	Known RBP	4.24	□□□□□ -1.73
TAF3	YPL011C	KAP123	P40069	1113 aa	Known RBP	4.24	□□□□□ -1.73
TAF3	YPL011C	SGF73	P53165	657 aa		4.24	□□□□□ -1.73
TAF3	YPL011C	DIG1	Q03063	452 aa	Known RBP	4.24	□□□□□ -1.73
TAF3	YPL011C	MCP2	Q06567	569 aa		4.24	□□□□□ -1.73
TAF3	YPL011C	SSP2	Q08646	371 aa		4.24	□□□□□ -1.73
TAF3	YPL011C	APL5	Q08951	932 aa	Known RBP	4.24	□□□□□ -1.73
TAF3	YPL011C	NEW1	Q08972	1196 aa	Known RBP	4.24	□□□□□ -1.73
TAF3	YPL011C	YBR085C-A	O43137	85 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	ALY1	P36117	915 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	EFM2	P38347	419 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	RFC1	P38630	861 aa	Known RBP	4.23	□□□□□ -1.73
TAF3	YPL011C	YND1	P40009	630 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	YIL169C	P40442	995 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	SIP4	P46954	829 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	BET4	Q00618	327 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	YMR254C	Q04838	102 aa		4.23	□□□□□ -1.73
TAF3	YPL011C	HXK2	P04807	486 aa	Known RBP	4.22	□□□□□ -1.73
TAF3	YPL011C	GAC1	P28006	793 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	SNU114	P36048	1008 aa	Known RBP	4.22	□□□□□ -1.73
TAF3	YPL011C	STB2	P46679	850 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	DPB11	P47027	764 aa	Predicted RBP	4.22	□□□□□ -1.73
TAF3	YPL011C	SMC3	P47037	1230 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	YNL181W	P53878	407 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	YMR178W	Q03219	274 aa	Known RBP	4.22	□□□□□ -1.73
TAF3	YPL011C	NDD1	Q08887	554 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	CHD1	P32657	1468 aa		4.22	□□□□□ -1.73
TAF3	YPL011C	MIA40	P36046	403 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	YPK3	P38070	525 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	YNG2	P38806	282 aa	Known RBP	4.21	□□□□□ -1.74
TAF3	YPL011C	UIP3	P39547	235 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	VRG4	P40107	337 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	AAD10	P47182	288 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	ZDS2	P54786	942 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	CTL1	Q03220	320 aa	Known RBP	4.21	□□□□□ -1.74
TAF3	YPL011C	EKI1	Q03764	534 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	YLR281C	Q05863	155 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	ADE13	Q05911	482 aa	Known RBP	4.21	□□□□□ -1.74
TAF3	YPL011C	INP53	Q12271	1107 aa		4.21	□□□□□ -1.74
TAF3	YPL011C	EDE1	P34216	1381 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	CDC23	P16522	626 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	PDB1	P32473	366 aa	Known RBP	4.2	□□□□□ -1.74
TAF3	YPL011C	PDR3	P33200	976 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	DIA4	P38705	446 aa	Predicted RBP	4.2	□□□□□ -1.74
TAF3	YPL011C	PHO90	P39535	881 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	DPH1	P40487	425 aa	Known RBP	4.2	□□□□□ -1.74
TAF3	YPL011C	YIL060W	P40519	144 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	NNF2	P53253	936 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	CBK1	P53894	756 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	SKG3	Q06315	1026 aa		4.2	□□□□□ -1.74
TAF3	YPL011C	FUM1	P08417	488 aa	Known RBP	4.19	□□□□□ -1.74
TAF3	YPL011C	RPB8	P20436	146 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	RER1	P25560	188 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	MGR1	P25573	417 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	PGS1	P25578	521 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	GCS1	P35197	352 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	YJR061W	P40355	935 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	RTS2	P40962	232 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	SMA1	Q02651	245 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	NBP2	Q12163	236 aa		4.19	□□□□□ -1.74
TAF3	YPL011C	HNM1	P19807	563 aa		4.18	□□□□□ -1.74
TAF3	YPL011C	PWP1	P21304	576 aa	Known RBP	4.18	□□□□□ -1.74
TAF3	YPL011C	RKM3	P38222	552 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms