RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C RRP9Q06506 573 aaKnown RBP3.94□□□□□ -1.78
CIT1YNR001C MCM21Q06675 368 aa3.94□□□□□ -1.78
CIT1YNR001C YDL073WQ07454 984 aa3.94□□□□□ -1.78
CIT1YNR001C TMA16Q08687 178 aa3.94□□□□□ -1.78
CIT1YNR001C PET111P08468 800 aa3.93□□□□□ -1.78
CIT1YNR001C STE12P13574 688 aa3.93□□□□□ -1.78
CIT1YNR001C MDH1P17505 334 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
CIT1YNR001C PRP4P20053 465 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C ADE2P21264 571 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C ERG8P24521 451 aa3.93□□□□□ -1.78
CIT1YNR001C PAP1P29468 568 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C PUP2P32379 260 aa3.93□□□□□ -1.78
CIT1YNR001C ZUO1P32527 433 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C RRP1P35178 278 aaPredicted RBP3.93□□□□□ -1.78
CIT1YNR001C SWH1P35845 1188 aa3.93□□□□□ -1.78
CIT1YNR001C ALY1P36117 915 aa3.93□□□□□ -1.78
CIT1YNR001C LAS1P36146 502 aaPredicted RBP3.93□□□□□ -1.78
CIT1YNR001C SRO77P38163 1010 aa3.93□□□□□ -1.78
CIT1YNR001C TDP1P38319 544 aa3.93□□□□□ -1.78
CIT1YNR001C OTU2P38747 307 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C SMF1P38925 575 aa3.93□□□□□ -1.78
CIT1YNR001C AFG3P39925 761 aa3.93□□□□□ -1.78
CIT1YNR001C ARB1P40024 610 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C MAM1P40065 302 aa3.93□□□□□ -1.78
CIT1YNR001C YNL195CP40168 261 aa3.93□□□□□ -1.78
CIT1YNR001C YIL161WP40449 235 aaKnown RBP3.93□□□□□ -1.78
CIT1YNR001C DOT5P40553 215 aa3.93□□□□□ -1.78
CIT1YNR001C AAD10P47182 288 aa3.93□□□□□ -1.78
CIT1YNR001C YGR066CP53242 292 aa3.93□□□□□ -1.78
CIT1YNR001C CSL4P53859 292 aaPredicted RBP3.93□□□□□ -1.78
CIT1YNR001C MUK1Q02866 612 aa3.93□□□□□ -1.78
CIT1YNR001C NGL3Q03210 505 aa3.93□□□□□ -1.78
CIT1YNR001C TMN2Q04562 672 aa3.93□□□□□ -1.78
CIT1YNR001C CIR2Q08822 631 aa3.93□□□□□ -1.78
CIT1YNR001C APL4Q12028 832 aa3.93□□□□□ -1.78
CIT1YNR001C TGL5Q12043 749 aa3.93□□□□□ -1.78
CIT1YNR001C REX3Q12090 404 aa3.93□□□□□ -1.78
CIT1YNR001C SUL2Q12325 893 aa3.93□□□□□ -1.78
CIT1YNR001C CPA2P03965 1118 aaKnown RBP3.92□□□□□ -1.78
CIT1YNR001C CUP1-1P0CX80 61 aa3.92□□□□□ -1.78
CIT1YNR001C CUP1-2P0CX81 61 aa3.92□□□□□ -1.78
CIT1YNR001C RNR1P21524 888 aaKnown RBP3.92□□□□□ -1.78
CIT1YNR001C RRP43P25359 394 aaPredicted RBP3.92□□□□□ -1.78
CIT1YNR001C POL4P25615 582 aa3.92□□□□□ -1.78
CIT1YNR001C PRP45P28004 379 aaPredicted RBP3.92□□□□□ -1.78
CIT1YNR001C HSP104P31539 908 aaKnown RBP3.92□□□□□ -1.78
CIT1YNR001C TFB1P32776 642 aa3.92□□□□□ -1.78
CIT1YNR001C KES1P35844 434 aaKnown RBP3.92□□□□□ -1.78
CIT1YNR001C RTT107P38850 1070 aa3.92□□□□□ -1.78
CIT1YNR001C PCL7P40186 285 aa3.92□□□□□ -1.78
CIT1YNR001C RGI2P40188 164 aa3.92□□□□□ -1.78
CIT1YNR001C THI6P41835 540 aa3.92□□□□□ -1.78
CIT1YNR001C IDS2P46958 469 aa3.92□□□□□ -1.78
CIT1YNR001C STB4P50104 949 aa3.92□□□□□ -1.78
CIT1YNR001C CUL3P53202 744 aa3.92□□□□□ -1.78
CIT1YNR001C MRPS35P53292 345 aa3.92□□□□□ -1.78
CIT1YNR001C YMR206WQ03695 313 aa3.92□□□□□ -1.78
CIT1YNR001C ECM22Q05958 814 aaPredicted RBP3.92□□□□□ -1.78
CIT1YNR001C VAM6Q07468 1049 aa3.92□□□□□ -1.78
CIT1YNR001C AIM6Q07716 390 aa3.92□□□□□ -1.78
CIT1YNR001C GRX6Q12438 231 aa3.92□□□□□ -1.78
CIT1YNR001C POM34Q12445 299 aa3.92□□□□□ -1.78
CIT1YNR001C YLR415CO13578 112 aa3.91□□□□□ -1.78
CIT1YNR001C RRP7P25368 297 aaPredicted RBP3.91□□□□□ -1.78
CIT1YNR001C YCR051WP25631 222 aa3.91□□□□□ -1.78
CIT1YNR001C CDC15P27636 974 aa3.91□□□□□ -1.78
CIT1YNR001C MTC7P32633 139 aa3.91□□□□□ -1.78
CIT1YNR001C AUR1P36107 401 aaPredicted RBP3.91□□□□□ -1.78
CIT1YNR001C MAL33P38157 468 aa3.91□□□□□ -1.78
CIT1YNR001C VID24P38263 362 aa3.91□□□□□ -1.78
CIT1YNR001C STB5P38699 743 aa3.91□□□□□ -1.78
CIT1YNR001C YNG2P38806 282 aaKnown RBP3.91□□□□□ -1.78
CIT1YNR001C LYS9P38999 446 aa3.91□□□□□ -1.78
CIT1YNR001C PSD1P39006 500 aa3.91□□□□□ -1.78
CIT1YNR001C RPN11P43588 306 aaKnown RBP3.91□□□□□ -1.78
CIT1YNR001C ROK1P45818 564 aaPredicted RBP3.91□□□□□ -1.78
CIT1YNR001C ASI2P53895 289 aa3.91□□□□□ -1.78
CIT1YNR001C MRS2Q01926 470 aa3.91□□□□□ -1.78
CIT1YNR001C YPL107WQ02873 248 aa3.91□□□□□ -1.78
CIT1YNR001C MUB1Q03162 620 aa3.91□□□□□ -1.78
CIT1YNR001C DPB4Q04603 196 aaKnown RBP3.91□□□□□ -1.78
CIT1YNR001C PEX19Q07418 342 aa3.91□□□□□ -1.78
CIT1YNR001C DFR1P07807 211 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
CIT1YNR001C YML002WP0CF17 737 aa3.9□□□□□ -1.78
CIT1YNR001C YEL043WP32618 956 aa3.9□□□□□ -1.78
CIT1YNR001C YHR112CP38716 378 aa3.9□□□□□ -1.78
CIT1YNR001C ERC1P38767 581 aa3.9□□□□□ -1.78
CIT1YNR001C CRG1P38892 291 aaRIP-Chip data3.9□□□□□ -1.78not detected
CIT1YNR001C REV7P38927 245 aa3.9□□□□□ -1.78
CIT1YNR001C ECM1P39715 212 aa3.9□□□□□ -1.78
CIT1YNR001C JHD1P40034 492 aa3.9□□□□□ -1.78
CIT1YNR001C RTT105P40063 208 aa3.9□□□□□ -1.78
CIT1YNR001C FTR1P40088 404 aa3.9□□□□□ -1.78
CIT1YNR001C FMP10P40098 244 aa3.9□□□□□ -1.78
CIT1YNR001C MET18P40469 1032 aa3.9□□□□□ -1.78
CIT1YNR001C CCT7P42943 550 aaKnown RBP3.9□□□□□ -1.78
CIT1YNR001C MTG1Q03151 367 aaPredicted RBP3.9□□□□□ -1.78
CIT1YNR001C CTK1Q03957 528 aaKnown RBP3.9□□□□□ -1.78
CIT1YNR001C GAD1Q04792 585 aa3.9□□□□□ -1.78
CIT1YNR001C RSF1Q05043 376 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms