RNA–Protein interactions for RNA: YNL260C

LTO1, Transcript of Essential protein that forms a complex with Rli1p and Yae1p, yeast

Gene LTO1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTO1	YNL260C	YFR020W	P43600	232 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	DPB11	P47027	764 aa	Predicted RBP	4.91	□□□□□ -1.62
LTO1	YNL260C	TAX4	P47030	604 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	IRC8	P47046	822 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	YPL071C	Q02864	156 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	UTP21	Q06078	939 aa	Predicted RBP	4.91	□□□□□ -1.62
LTO1	YNL260C	YLR049C	Q12110	428 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	RDL1	Q12305	139 aa	Known RBP	4.91	□□□□□ -1.62
LTO1	YNL260C	SCM3	Q12334	223 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	SPE4	Q12455	300 aa		4.91	□□□□□ -1.62
LTO1	YNL260C	YIH1	P25637	258 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	GSY2	P27472	705 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	FTH1	P38310	465 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	IMD2	P38697	523 aa	Known RBP	4.9	□□□□□ -1.63
LTO1	YNL260C	TPA1	P40032	644 aa	Known RBP	4.9	□□□□□ -1.63
LTO1	YNL260C	DOT5	P40553	215 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	IMD3	P50095	523 aa	Known RBP	4.9	□□□□□ -1.63
LTO1	YNL260C	DIA3	P52290	468 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	STR3	P53101	465 aa	Known RBP	4.9	□□□□□ -1.63
LTO1	YNL260C	PFA5	Q03289	374 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	YEH1	Q07804	573 aa		4.9	□□□□□ -1.63
LTO1	YNL260C	ARD1	P07347	238 aa	Predicted RBP	4.89	□□□□□ -1.63
LTO1	YNL260C	EST1	P17214	699 aa	Predicted RBP	4.89	□□□□□ -1.63
LTO1	YNL260C	YCR006C	P25350	157 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	MNN2	P38069	597 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	MAF1	P41910	395 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	CTK2	P46962	323 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	NNF2	P53253	936 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	ZDS2	P54786	942 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	SNU56	Q03782	492 aa	Known RBP	4.89	□□□□□ -1.63
LTO1	YNL260C	YJR112W-A	Q3E743	109 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	YPT6	Q99260	215 aa		4.89	□□□□□ -1.63
LTO1	YNL260C	ILS1	P09436	1072 aa	Known RBP	4.88	□□□□□ -1.63
LTO1	YNL260C	SPE2	P21182	396 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	MAK32	P23060	363 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	ORC2	P32833	620 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	UTP9	P38882	575 aa	Known RBP	4.88	□□□□□ -1.63
LTO1	YNL260C	ERV46	P39727	415 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	TPO3	Q06451	622 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	SPN1	Q06505	410 aa	Predicted RBP	4.88	□□□□□ -1.63
LTO1	YNL260C	GET3	Q12154	354 aa	Known RBP	4.88	□□□□□ -1.63
LTO1	YNL260C	INP53	Q12271	1107 aa		4.88	□□□□□ -1.63
LTO1	YNL260C	LCB1	P25045	558 aa	Known RBP	4.87	□□□□□ -1.63
LTO1	YNL260C	ADH7	P25377	361 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	HOT13	P36078	116 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	DIA4	P38705	446 aa	Predicted RBP	4.87	□□□□□ -1.63
LTO1	YNL260C	PKP1	P40530	394 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	CIN1	P40987	1014 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	RPN11	P43588	306 aa	Known RBP	4.87	□□□□□ -1.63
LTO1	YNL260C	ORC5	P50874	479 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	YGR066C	P53242	292 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	MAK10	Q02197	733 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	BSP1	Q06604	576 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	LUC7	Q07508	261 aa	Predicted RBP	4.87	□□□□□ -1.63
LTO1	YNL260C	BUD7	Q08754	746 aa		4.87	□□□□□ -1.63
LTO1	YNL260C	MF(ALPHA)1	P01149	165 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	TUB1	P09733	447 aa	Known RBP	4.86	□□□□□ -1.63
LTO1	YNL260C	RAP1	P11938	827 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	ROX1	P25042	368 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	YKL050C	P35736	922 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	RIX1	P38883	763 aa	Predicted RBP	4.86	□□□□□ -1.63
LTO1	YNL260C	UIP3	P39547	235 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
LTO1	YNL260C	SMC3	P47037	1230 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	VID30	P53076	958 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	ATP23	P53722	227 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	YMR155W	Q03795	547 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	DPB4	Q04603	196 aa	Known RBP	4.86	□□□□□ -1.63
LTO1	YNL260C	VPS38	Q05919	439 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	PDR8	Q06149	701 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	FMP40	Q08968	688 aa	Predicted RBP	4.86	□□□□□ -1.63
LTO1	YNL260C	APL4	Q12028	832 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	ATG9	Q12142	997 aa		4.86	□□□□□ -1.63
LTO1	YNL260C	YER145C-A	A0A023PYF4	145 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	CHO1	P08456	276 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	TKL1	P23254	680 aa	Known RBP	4.85	□□□□□ -1.63
LTO1	YNL260C	ILV6	P25605	309 aa	Known RBP	4.85	□□□□□ -1.63
LTO1	YNL260C	UBP11	P36026	717 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	SNU114	P36048	1008 aa	Known RBP	4.85	□□□□□ -1.63
LTO1	YNL260C	BYE1	P36106	594 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	YEL057C	P39983	233 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	PTR3	P43606	678 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	YDR239C	Q03780	787 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	YOL159C	Q08300	171 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	RIM20	Q12033	661 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	SFI1	Q12369	946 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	RTN2	Q12443	393 aa		4.85	□□□□□ -1.63
LTO1	YNL260C	BNR1	P40450	1375 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	GAL80	P04387	435 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
LTO1	YNL260C	URE2	P23202	354 aa	Known RBP	4.84	□□□□□ -1.63
LTO1	YNL260C	NPL6	P32832	435 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	NFU1	P32860	256 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	SEF1	P34228	1148 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	CDC1	P40986	491 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	GPD2	P41911	440 aa	Known RBP	4.84	□□□□□ -1.63
LTO1	YNL260C	IPI3	P53877	555 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	YLR455W	Q06188	304 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	MCH4	Q08268	501 aa		4.84	□□□□□ -1.63
LTO1	YNL260C	YPL272C	Q08984	517 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms