RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YME1P32795 747 aa2.46□□□□□ -2.02
UBP15YMR304W YBR137WP38276 179 aa2.46□□□□□ -2.02
UBP15YMR304W APE4P38821 490 aa2.46□□□□□ -2.02
UBP15YMR304W RPN10P38886 268 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W YJL206CP39529 758 aa2.46□□□□□ -2.02
UBP15YMR304W ASG1P40467 964 aa2.46□□□□□ -2.02
UBP15YMR304W CCT8P47079 568 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W TOM22P49334 152 aa2.46□□□□□ -2.02
UBP15YMR304W RSC4Q02206 625 aa2.46□□□□□ -2.02
UBP15YMR304W RLI1Q03195 608 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W PRM15Q03262 622 aa2.46□□□□□ -2.02
UBP15YMR304W VMS1Q04311 632 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W TAF9Q05027 157 aa2.46□□□□□ -2.02
UBP15YMR304W SKG3Q06315 1026 aa2.46□□□□□ -2.02
UBP15YMR304W PML1Q07930 204 aaPredicted RBP2.46□□□□□ -2.02
UBP15YMR304W SNX3Q08826 162 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W BBP1Q12365 385 aa2.46□□□□□ -2.02
UBP15YMR304W STT4P37297 1900 aa2.46□□□□□ -2.02
UBP15YMR304W TDH1P00360 332 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W FUR1P18562 216 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W PRD1P25375 712 aa2.46□□□□□ -2.02
UBP15YMR304W GCD7P32502 381 aaPredicted RBP2.46□□□□□ -2.02
UBP15YMR304W SMI1P32566 505 aa2.46□□□□□ -2.02
UBP15YMR304W VMA8P32610 256 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W YBR032WP38223 100 aa2.46□□□□□ -2.02
UBP15YMR304W MMS21P38632 267 aa2.46□□□□□ -2.02
UBP15YMR304W SMC2P38989 1170 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W SEN34P39707 275 aa2.46□□□□□ -2.02
UBP15YMR304W UTP25P40498 721 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W GTT1P40582 234 aa2.46□□□□□ -2.02
UBP15YMR304W DOC1P53068 250 aa2.46□□□□□ -2.02
UBP15YMR304W SLI1P53304 468 aa2.46□□□□□ -2.02
UBP15YMR304W YNL040WP53960 456 aaPredicted RBP2.46□□□□□ -2.02
UBP15YMR304W RRN5Q02983 363 aa2.46□□□□□ -2.02
UBP15YMR304W CSI1Q04368 295 aa2.46□□□□□ -2.02
UBP15YMR304W VIP1Q06685 1146 aaKnown RBP2.46□□□□□ -2.02
UBP15YMR304W ATG11Q12527 1178 aa2.46□□□□□ -2.02
UBP15YMR304W CPA2P03965 1118 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W PUP1P25043 261 aa2.45□□□□□ -2.02
UBP15YMR304W YCR101CP25607 182 aa2.45□□□□□ -2.02
UBP15YMR304W RSC6P25632 483 aa2.45□□□□□ -2.02
UBP15YMR304W MGM101P32787 269 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W AAP1P37898 856 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W EDC3P39998 551 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W ZRG8P40021 1076 aa2.45□□□□□ -2.02
UBP15YMR304W PSY2P40164 858 aa2.45□□□□□ -2.02
UBP15YMR304W RSM25P40496 264 aa2.45□□□□□ -2.02
UBP15YMR304W PRY1P47032 299 aa2.45□□□□□ -2.02
UBP15YMR304W ALG11P53954 548 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W IRC4Q03036 179 aa2.45□□□□□ -2.02
UBP15YMR304W CRR1Q05790 422 aa2.45□□□□□ -2.02
UBP15YMR304W SPH1Q06160 661 aa2.45□□□□□ -2.02
UBP15YMR304W ARO10Q06408 635 aa2.45□□□□□ -2.02
UBP15YMR304W THI22Q06490 572 aa2.45□□□□□ -2.02
UBP15YMR304W PFK27Q12471 397 aaPredicted RBP2.45□□□□□ -2.02
UBP15YMR304W SLH1P53327 1967 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W RPL43AP0CX25 92 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W RPL43BP0CX26 92 aa2.45□□□□□ -2.02
UBP15YMR304W BOS1P25385 244 aa2.45□□□□□ -2.02
UBP15YMR304W MGR1P25573 417 aa2.45□□□□□ -2.02
UBP15YMR304W GSY2P27472 705 aa2.45□□□□□ -2.02
UBP15YMR304W MEI4P29467 408 aa2.45□□□□□ -2.02
UBP15YMR304W PET127P32606 800 aa2.45□□□□□ -2.02
UBP15YMR304W ISC10P32645 267 aa2.45□□□□□ -2.02
UBP15YMR304W TFB1P32776 642 aa2.45□□□□□ -2.02
UBP15YMR304W YBL010CP32788 280 aa2.45□□□□□ -2.02
UBP15YMR304W GYP6P32806 458 aa2.45□□□□□ -2.02
UBP15YMR304W MCX1P38323 520 aaPredicted RBP2.45□□□□□ -2.02
UBP15YMR304W SLS1P42900 643 aa2.45□□□□□ -2.02
UBP15YMR304W CNN1P43618 361 aa2.45□□□□□ -2.02
UBP15YMR304W FCP1Q03254 732 aa2.45□□□□□ -2.02
UBP15YMR304W MCA1Q08601 432 aa2.45□□□□□ -2.02
UBP15YMR304W AEP3Q12089 606 aa2.45□□□□□ -2.02
UBP15YMR304W SNU23Q12368 194 aaPredicted RBP2.45□□□□□ -2.02
UBP15YMR304W RRP36Q12481 300 aaPredicted RBP2.45□□□□□ -2.02
UBP15YMR304W CDC36P06100 191 aaPredicted RBP2.45□□□□□ -2.02
UBP15YMR304W YCR051WP25631 222 aa2.45□□□□□ -2.02
UBP15YMR304W RAD27P26793 382 aa2.45□□□□□ -2.02
UBP15YMR304W RAD14P28519 371 aa2.45□□□□□ -2.02
UBP15YMR304W CHS3P29465 1165 aa2.45□□□□□ -2.02
UBP15YMR304W NFU1P32860 256 aa2.45□□□□□ -2.02
UBP15YMR304W GDH2P33327 1092 aaKnown RBP2.45□□□□□ -2.02
UBP15YMR304W STB6P36085 766 aa2.45□□□□□ -2.02
UBP15YMR304W MSS4P38994 779 aa2.45□□□□□ -2.02
UBP15YMR304W PRK1P40494 810 aa2.45□□□□□ -2.02
UBP15YMR304W CWC24P53769 259 aa2.45□□□□□ -2.02
UBP15YMR304W SAM50P53969 484 aa2.45□□□□□ -2.02
UBP15YMR304W ACS1Q01574 713 aa2.45□□□□□ -2.02
UBP15YMR304W YML083CQ04526 418 aa2.45□□□□□ -2.02
UBP15YMR304W THI7Q05998 598 aa2.45□□□□□ -2.02
UBP15YMR304W YCS4Q06156 1176 aa2.45□□□□□ -2.02
UBP15YMR304W ALE1Q08548 619 aa2.45□□□□□ -2.02
UBP15YMR304W NUR1Q12066 484 aa2.45□□□□□ -2.02
UBP15YMR304W DCS2Q12123 353 aa2.45□□□□□ -2.02
UBP15YMR304W ATP2P00830 511 aaKnown RBP2.44□□□□□ -2.02
UBP15YMR304W ARG3P05150 338 aa2.44□□□□□ -2.02
UBP15YMR304W VAS1P07806 1104 aaKnown RBP2.44□□□□□ -2.02
UBP15YMR304W ILS1P09436 1072 aaKnown RBP2.44□□□□□ -2.02
UBP15YMR304W YPK1P12688 680 aaKnown RBP2.44□□□□□ -2.02
UBP15YMR304W RPO26P20435 155 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms