RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	RAI1	P53063	387 aa	Known RBP	1.39	□□□□□ -2.19
CLU1	YMR012W	ROG1	P53118	685 aa		1.39	□□□□□ -2.19
CLU1	YMR012W	CNM67	P53865	581 aa	Known RBP	1.39	□□□□□ -2.19
CLU1	YMR012W	MFM1	Q02783	413 aa		1.39	□□□□□ -2.19
CLU1	YMR012W	YML119W	Q03208	357 aa		1.39	□□□□□ -2.19
CLU1	YMR012W	YDL073W	Q07454	984 aa		1.39	□□□□□ -2.19
CLU1	YMR012W	YPL277C	Q08989	487 aa		1.39	□□□□□ -2.19
CLU1	YMR012W	MSP1	P28737	362 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	PRO3	P32263	286 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	TAT1	P38085	619 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	IDS2	P46958	469 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	IMD4	P50094	524 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	UBP15	P50101	1230 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	PFA5	Q03289	374 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	EFR3	Q03653	782 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	RSC2	Q06488	889 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	DIN7	Q12086	430 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	SAC3	P46674	1301 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	MER1	P16523	270 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	HOP1	P20050	605 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	ACE2	P21192	770 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	YCL042W	P25572	119 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	BCS1	P32839	456 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	WBP1	P33767	430 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	YEL1	P34225	687 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	YKL097C	P34245	136 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	CBR1	P38626	284 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	YHL012W	P38709	493 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	DSE1	P40077	573 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	CCT5	P40413	562 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	AGX1	P43567	385 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	TAF4	P50105	388 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	PUS7	Q08647	676 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	DIT1	P21623	536 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	GAS1	P22146	559 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	CWH43	P25618	953 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	PAP1	P29468	568 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	1.38	□□□□□ -2.19	not detected
CLU1	YMR012W	POL12	P38121	705 aa	Predicted RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	NPR3	P38742	1146 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	END3	P39013	349 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	YFR020W	P43600	232 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	NOG2	P53742	486 aa	Known RBP	1.38	□□□□□ -2.19
CLU1	YMR012W	SSY1	Q03770	852 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	DCI1	Q08558	271 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	YOR223W	Q12015	292 aa		1.38	□□□□□ -2.19
CLU1	YMR012W	DMC1	P25453	334 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	MRPL36	P36531	177 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	ARO9	P38840	513 aa	Predicted RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	AXL1	P40851	1208 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	DUG1	P43616	481 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	NOP9	P47077	666 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	GTO1	P48239	356 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	DAK1	P54838	584 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	FDC1	Q03034	503 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	MUS81	Q04149	632 aa	Predicted RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	SYT1	Q06836	1226 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	SUL2	Q12325	893 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	PNS1	Q12412	539 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	MCM1	P11746	286 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	PUT4	P15380	627 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	PRP4	P20053	465 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	KGD1	P20967	1014 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	ROX1	P25042	368 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	STE50	P25344	346 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	SED4	P25365	1065 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	YHR078W	P38799	552 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	FET5	P43561	622 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	YGR079W	P53249	370 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.37	□□□□□ -2.19	not detected
CLU1	YMR012W	HLR1	Q04429	423 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	DUS4	Q06063	367 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	ARR2	Q06597	130 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	1.37	□□□□□ -2.19	not detected
CLU1	YMR012W	ACM1	Q08981	209 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	RRI2	Q12348	645 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	PMS1	P14242	873 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	CSM1	P25651	190 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	SIP1	P32578	815 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	YHL026C	P38740	315 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	AIP1	P46680	615 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	DLD2	P46681	530 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	SOL4	P53315	255 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	YNL058C	P53947	316 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	DPB4	Q04603	196 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	TFC6	Q06339	672 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	TDA6	Q06466	467 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	MRPL35	Q06678	367 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	BRE4	Q07660	1125 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	DIS3	Q08162	1001 aa	Known RBP	1.37	□□□□□ -2.19
CLU1	YMR012W	GLE1	Q12315	538 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	SWM1	Q12379	170 aa		1.37	□□□□□ -2.19
CLU1	YMR012W	GAL10	P04397	699 aa		1.36	□□□□□ -2.19
CLU1	YMR012W	ADE2	P21264	571 aa	Known RBP	1.36	□□□□□ -2.19
CLU1	YMR012W	UBC1	P21734	215 aa	Known RBP	1.36	□□□□□ -2.19
CLU1	YMR012W	YME1	P32795	747 aa		1.36	□□□□□ -2.19
CLU1	YMR012W	SEF1	P34228	1148 aa		1.36	□□□□□ -2.19
CLU1	YMR012W	AUR1	P36107	401 aa	Predicted RBP	1.36	□□□□□ -2.19
CLU1	YMR012W	FTR1	P40088	404 aa		1.36	□□□□□ -2.19
CLU1	YMR012W	YIL166C	P40445	542 aa		1.36	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms