RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C GEP3Q08622 556 aa5.36□□□□□ -1.55
NMD4YLR363C RVB2Q12464 471 aaKnown RBP5.36□□□□□ -1.55
NMD4YLR363C BIK1P11709 440 aa5.35□□□□□ -1.55
NMD4YLR363C LAC1P28496 418 aa5.35□□□□□ -1.55
NMD4YLR363C GSH1P32477 678 aa5.35□□□□□ -1.55
NMD4YLR363C IMA1P53051 589 aa5.35□□□□□ -1.55
NMD4YLR363C CDC45Q08032 650 aa5.35□□□□□ -1.55
NMD4YLR363C LEA1Q08963 238 aaPredicted RBP5.35□□□□□ -1.55
NMD4YLR363C GET3Q12154 354 aaKnown RBP5.35□□□□□ -1.55
NMD4YLR363C COX1P00401 534 aa5.34□□□□□ -1.55
NMD4YLR363C PET122P10355 254 aa5.34□□□□□ -1.55
NMD4YLR363C SWI4P25302 1093 aaKnown RBP5.34□□□□□ -1.55
NMD4YLR363C HES1P35843 434 aa5.34□□□□□ -1.55
NMD4YLR363C SPC72P39723 622 aa5.34□□□□□ -1.55
NMD4YLR363C SKP2P42843 763 aa5.34□□□□□ -1.55
NMD4YLR363C UBX6P47049 396 aa5.34□□□□□ -1.55
NMD4YLR363C ORC5P50874 479 aa5.34□□□□□ -1.55
NMD4YLR363C YGR079WP53249 370 aa5.34□□□□□ -1.55
NMD4YLR363C CSI1Q04368 295 aa5.34□□□□□ -1.55
NMD4YLR363C GTB1Q04924 702 aa5.34□□□□□ -1.55
NMD4YLR363C SUL2Q12325 893 aa5.34□□□□□ -1.55
NMD4YLR363C YPR089WO13585 888 aa5.33□□□□□ -1.56
NMD4YLR363C DAL5P15365 543 aa5.33□□□□□ -1.56
NMD4YLR363C PFK2P16862 959 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
NMD4YLR363C URK1P27515 501 aa5.33□□□□□ -1.56
NMD4YLR363C ARP2P32381 391 aaKnown RBP5.33□□□□□ -1.56
NMD4YLR363C GCD7P32502 381 aaPredicted RBP5.33□□□□□ -1.56
NMD4YLR363C RPT3P33298 428 aaKnown RBP5.33□□□□□ -1.56
NMD4YLR363C YHL041WP38730 149 aa5.33□□□□□ -1.56
NMD4YLR363C FSH1P38777 243 aaKnown RBP5.33□□□□□ -1.56
NMD4YLR363C ERV46P39727 415 aa5.33□□□□□ -1.56
NMD4YLR363C FAF1P40546 346 aaPredicted RBP5.33□□□□□ -1.56
NMD4YLR363C MRPL1Q04599 285 aa5.33□□□□□ -1.56
NMD4YLR363C SNF3P10870 884 aa5.32□□□□□ -1.56
NMD4YLR363C SEC18P18759 758 aaKnown RBP5.32□□□□□ -1.56
NMD4YLR363C ASK1P35734 292 aa5.32□□□□□ -1.56
NMD4YLR363C YMR124WP39523 943 aaKnown RBP5.32□□□□□ -1.56
NMD4YLR363C SCW4P53334 386 aaKnown RBP5.32□□□□□ -1.56
NMD4YLR363C MTG1Q03151 367 aaPredicted RBP5.32□□□□□ -1.56
NMD4YLR363C RRI2Q12348 645 aa5.32□□□□□ -1.56
NMD4YLR363C CYB2P00175 591 aa5.31□□□□□ -1.56
NMD4YLR363C YER190C-BP0CX94 160 aa5.31□□□□□ -1.56
NMD4YLR363C YEL077W-AP0CX95 160 aa5.31□□□□□ -1.56
NMD4YLR363C YGR296C-BP0CX96 160 aa5.31□□□□□ -1.56
NMD4YLR363C YPL283W-BP0CX97 160 aa5.31□□□□□ -1.56
NMD4YLR363C YPR204C-AP0CX98 160 aa5.31□□□□□ -1.56
NMD4YLR363C PHO81P17442 1178 aa5.31□□□□□ -1.56
NMD4YLR363C MSS51P32335 436 aa5.31□□□□□ -1.56
NMD4YLR363C OCT1P35999 772 aa5.31□□□□□ -1.56
NMD4YLR363C PTK1P36002 662 aaPredicted RBP5.31□□□□□ -1.56
NMD4YLR363C KEL1P38853 1164 aaKnown RBP5.31□□□□□ -1.56
NMD4YLR363C UBP7P40453 1071 aa5.31□□□□□ -1.56
NMD4YLR363C YPL068CQ02749 293 aa5.31□□□□□ -1.56
NMD4YLR363C GSC2P40989 1895 aa5.3□□□□□ -1.56
NMD4YLR363C PAH1P32567 862 aa5.3□□□□□ -1.56
NMD4YLR363C ERG7P38604 731 aa5.3□□□□□ -1.56
NMD4YLR363C TOM71P38825 639 aaKnown RBP5.3□□□□□ -1.56
NMD4YLR363C FLO5P38894 1075 aa5.3□□□□□ -1.56
NMD4YLR363C BUD16P39988 312 aa5.3□□□□□ -1.56
NMD4YLR363C VAB2P40003 282 aa5.3□□□□□ -1.56
NMD4YLR363C YJL107CP42947 387 aa5.3□□□□□ -1.56
NMD4YLR363C TAM41P53230 385 aa5.3□□□□□ -1.56
NMD4YLR363C VTC3Q02725 835 aa5.3□□□□□ -1.56
NMD4YLR363C YDR109CQ04585 715 aa5.3□□□□□ -1.56
NMD4YLR363C INM2Q05533 292 aa5.3□□□□□ -1.56
NMD4YLR363C ATG23Q06671 453 aa5.3□□□□□ -1.56
NMD4YLR363C PFA4Q12006 378 aa5.3□□□□□ -1.56
NMD4YLR363C TY3A-GQ12173 290 aa5.3□□□□□ -1.56
NMD4YLR363C HER1Q12276 1246 aa5.3□□□□□ -1.56
NMD4YLR363C NCB2Q92317 146 aa5.3□□□□□ -1.56
NMD4YLR363C TY3A-IQ99219 290 aa5.3□□□□□ -1.56
NMD4YLR363C CLB4P24871 460 aa5.29□□□□□ -1.56
NMD4YLR363C ARN1P38731 627 aa5.29□□□□□ -1.56
NMD4YLR363C YNG2P38806 282 aaKnown RBP5.29□□□□□ -1.56
NMD4YLR363C PUG1P40100 303 aa5.29□□□□□ -1.56
NMD4YLR363C PSF2P40359 213 aa5.29□□□□□ -1.56
NMD4YLR363C DJP1P40564 432 aa5.29□□□□□ -1.56
NMD4YLR363C LYS14P40971 790 aa5.29□□□□□ -1.56
NMD4YLR363C TCB2P48231 1178 aa5.29□□□□□ -1.56
NMD4YLR363C BAG7Q12128 409 aa5.29□□□□□ -1.56
NMD4YLR363C GAL4P04386 881 aa5.28□□□□□ -1.56
NMD4YLR363C CDC60P26637 1090 aaKnown RBP5.28□□□□□ -1.56
NMD4YLR363C YBR138CP38277 524 aa5.28□□□□□ -1.56
NMD4YLR363C ACA1P39970 489 aa5.28□□□□□ -1.56
NMD4YLR363C ZAP1P47043 880 aa5.28□□□□□ -1.56
NMD4YLR363C MSY1P48527 492 aa5.28□□□□□ -1.56
NMD4YLR363C YPR003CP53394 754 aa5.28□□□□□ -1.56
NMD4YLR363C TRS130Q03660 1102 aa5.28□□□□□ -1.56
NMD4YLR363C CIR2Q08822 631 aa5.28□□□□□ -1.56
NMD4YLR363C CFT2Q12102 859 aaPredicted RBP5.28□□□□□ -1.56
NMD4YLR363C YBL028CP38202 106 aa5.27□□□□□ -1.57
NMD4YLR363C PHM8P40025 321 aa5.27□□□□□ -1.57
NMD4YLR363C IRC8P47046 822 aa5.27□□□□□ -1.57
NMD4YLR363C RPL15BP54780 204 aaPredicted RBP5.27□□□□□ -1.57
NMD4YLR363C RRI1Q12468 440 aa5.27□□□□□ -1.57
NMD4YLR363C DUR1,2P32528 1835 aaKnown RBP5.27□□□□□ -1.57
NMD4YLR363C AIM17P23180 465 aaKnown RBP5.26□□□□□ -1.57
NMD4YLR363C CNA1P23287 553 aa5.26□□□□□ -1.57
NMD4YLR363C CST26P38226 397 aa5.26□□□□□ -1.57
NMD4YLR363C TPA1P40032 644 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms