RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C ABP140Q08641 628 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C ARP7Q12406 477 aa5.84□□□□□ -1.47
SSK1YLR006C ISN1Q99312 450 aa5.84□□□□□ -1.47
SSK1YLR006C TDH1P00360 332 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C ARG3P05150 338 aa5.83□□□□□ -1.48
SSK1YLR006C YML002WP0CF17 737 aa5.83□□□□□ -1.48
SSK1YLR006C RAD18P10862 487 aa5.83□□□□□ -1.48
SSK1YLR006C TEC1P18412 486 aa5.83□□□□□ -1.48
SSK1YLR006C SFL1P20134 766 aa5.83□□□□□ -1.48
SSK1YLR006C MRPS28P21771 286 aa5.83□□□□□ -1.48
SSK1YLR006C TRM2P33753 639 aa5.83□□□□□ -1.48
SSK1YLR006C GCS1P35197 352 aa5.83□□□□□ -1.48
SSK1YLR006C ALG3P38179 458 aa5.83□□□□□ -1.48
SSK1YLR006C ATG14P38270 344 aa5.83□□□□□ -1.48
SSK1YLR006C GZF3P42944 551 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C RGD2P43556 714 aa5.83□□□□□ -1.48
SSK1YLR006C UBP15P50101 1230 aa5.83□□□□□ -1.48
SSK1YLR006C TAF6P53040 516 aa5.83□□□□□ -1.48
SSK1YLR006C ECM11Q04110 302 aa5.83□□□□□ -1.48
SSK1YLR006C HLR1Q04429 423 aa5.83□□□□□ -1.48
SSK1YLR006C RBD2Q12270 262 aa5.83□□□□□ -1.48
SSK1YLR006C COX11P19516 300 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C GRR1P24814 1151 aa5.83□□□□□ -1.48
SSK1YLR006C SYP1P25623 870 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C SBA1P28707 216 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C NUF2P33895 451 aa5.83□□□□□ -1.48
SSK1YLR006C DUG2P38149 878 aa5.83□□□□□ -1.48
SSK1YLR006C SSZ1P38788 538 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C MND2P40577 368 aa5.83□□□□□ -1.48
SSK1YLR006C BNA6P43619 295 aa5.83□□□□□ -1.48
SSK1YLR006C DRN1P53255 507 aaKnown RBP5.83□□□□□ -1.48
SSK1YLR006C KTR5P53966 522 aaPredicted RBP5.83□□□□□ -1.48
SSK1YLR006C KIN4Q01919 800 aa5.83□□□□□ -1.48
SSK1YLR006C CUS1Q02554 436 aaPredicted RBP5.83□□□□□ -1.48
SSK1YLR006C ABZ2Q03266 374 aa5.83□□□□□ -1.48
SSK1YLR006C YML037CQ03703 340 aa5.83□□□□□ -1.48
SSK1YLR006C AIM32Q04689 311 aa5.83□□□□□ -1.48
SSK1YLR006C IWR1Q07532 353 aaPredicted RBP5.83□□□□□ -1.48
SSK1YLR006C GIS3Q12418 502 aa5.83□□□□□ -1.48
SSK1YLR006C YPT6Q99260 215 aa5.83□□□□□ -1.48
SSK1YLR006C RPL24AP04449 155 aaKnown RBP5.82□□□□□ -1.48
SSK1YLR006C RNR1P21524 888 aaKnown RBP5.82□□□□□ -1.48
SSK1YLR006C KAR4P25583 335 aa5.82□□□□□ -1.48
SSK1YLR006C ZUO1P32527 433 aaKnown RBP5.82□□□□□ -1.48
SSK1YLR006C KAP122P32767 1081 aa5.82□□□□□ -1.48
SSK1YLR006C SHP1P34223 423 aa5.82□□□□□ -1.48
SSK1YLR006C CSG2P35206 410 aa5.82□□□□□ -1.48
SSK1YLR006C YBR138CP38277 524 aa5.82□□□□□ -1.48
SSK1YLR006C SPC97P38863 823 aa5.82□□□□□ -1.48
SSK1YLR006C YER010CP40011 234 aa5.82□□□□□ -1.48
SSK1YLR006C YNL115CP53925 644 aa5.82□□□□□ -1.48
SSK1YLR006C HXT15P54854 567 aa5.82□□□□□ -1.48
SSK1YLR006C ERB1Q04660 807 aaKnown RBP5.82□□□□□ -1.48
SSK1YLR006C ORM2Q06144 216 aa5.82□□□□□ -1.48
SSK1YLR006C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SSK1YLR006C YLR053CQ12026 108 aa5.82□□□□□ -1.48
SSK1YLR006C TPK1P06244 397 aa5.81□□□□□ -1.48
SSK1YLR006C RAD10P06838 210 aa5.81□□□□□ -1.48
SSK1YLR006C ADE3P07245 946 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C SSC1P0CS90 654 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C UNG1P12887 359 aa5.81□□□□□ -1.48
SSK1YLR006C HPR1P17629 752 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C DAP2P18962 818 aa5.81□□□□□ -1.48
SSK1YLR006C SIS1P25294 352 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C SNT1P25357 1226 aa5.81□□□□□ -1.48
SSK1YLR006C TPO5P36029 618 aa5.81□□□□□ -1.48
SSK1YLR006C PCA1P38360 1216 aa5.81□□□□□ -1.48
SSK1YLR006C YER156CP40093 338 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C ATF1P40353 525 aa5.81□□□□□ -1.48
SSK1YLR006C ECM9Q02202 377 aa5.81□□□□□ -1.48
SSK1YLR006C SPP1Q03012 353 aa5.81□□□□□ -1.48
SSK1YLR006C BSC2Q05611 235 aa5.81□□□□□ -1.48
SSK1YLR006C MSC3Q05812 728 aa5.81□□□□□ -1.48
SSK1YLR006C DUS3Q06053 668 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C BOP2Q06150 570 aa5.81□□□□□ -1.48
SSK1YLR006C LAG2Q92325 660 aa5.81□□□□□ -1.48
SSK1YLR006C CDC42P19073 191 aa5.81□□□□□ -1.48
SSK1YLR006C SIN4P32259 974 aa5.81□□□□□ -1.48
SSK1YLR006C DYS1P38791 387 aa5.81□□□□□ -1.48
SSK1YLR006C NPP2P39997 493 aa5.81□□□□□ -1.48
SSK1YLR006C PHO86P46956 311 aa5.81□□□□□ -1.48
SSK1YLR006C ABM1P47146 123 aa5.81□□□□□ -1.48
SSK1YLR006C TOM22P49334 152 aa5.81□□□□□ -1.48
SSK1YLR006C LCL3P53153 274 aa5.81□□□□□ -1.48
SSK1YLR006C TEP1P53916 434 aa5.81□□□□□ -1.48
SSK1YLR006C PRM6Q04705 352 aa5.81□□□□□ -1.48
SSK1YLR006C YLR225CQ05948 407 aaKnown RBP5.81□□□□□ -1.48
SSK1YLR006C GMC2Q06201 188 aa5.81□□□□□ -1.48
SSK1YLR006C PCD1Q12524 340 aa5.81□□□□□ -1.48
SSK1YLR006C MOT1P32333 1867 aa5.81□□□□□ -1.48
SSK1YLR006C HXK2P04807 486 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C CBP1P07252 654 aa5.8□□□□□ -1.48
SSK1YLR006C TUB3P09734 445 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C RPS21AP0C0V8 87 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C YER152CP10356 443 aa5.8□□□□□ -1.48
SSK1YLR006C CDC24P11433 854 aaPredicted RBP5.8□□□□□ -1.48
SSK1YLR006C HOP1P20050 605 aa5.8□□□□□ -1.48
SSK1YLR006C YCK2P23292 546 aaKnown RBP5.8□□□□□ -1.48
SSK1YLR006C PHO91P27514 894 aa5.8□□□□□ -1.48
SSK1YLR006C PCM1P38628 557 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms