RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C STV1P37296 890 aa4.44□□□□□ -1.7
RPF2YKR081C YPK3P38070 525 aa4.44□□□□□ -1.7
RPF2YKR081C RFC1P38630 861 aaKnown RBP4.44□□□□□ -1.7
RPF2YKR081C UME6P39001 836 aa4.44□□□□□ -1.7
RPF2YKR081C CCT4P39078 528 aaKnown RBP4.44□□□□□ -1.7
RPF2YKR081C YFR020WP43600 232 aa4.44□□□□□ -1.7
RPF2YKR081C YTP1P53584 459 aa4.44□□□□□ -1.7
RPF2YKR081C REG1Q00816 1014 aa4.44□□□□□ -1.7
RPF2YKR081C GUK1P15454 187 aaKnown RBP4.43□□□□□ -1.7
RPF2YKR081C PPZ1P26570 692 aa4.43□□□□□ -1.7
RPF2YKR081C IAH1P41734 238 aa4.43□□□□□ -1.7
RPF2YKR081C YJR008WP47085 338 aa4.43□□□□□ -1.7
RPF2YKR081C VPS4P52917 437 aa4.43□□□□□ -1.7
RPF2YKR081C RRT6P53117 311 aaPredicted RBP4.43□□□□□ -1.7
RPF2YKR081C NUS1Q12063 375 aa4.43□□□□□ -1.7
RPF2YKR081C HXK2P04807 486 aaKnown RBP4.42□□□□□ -1.7
RPF2YKR081C RPB8P20436 146 aa4.42□□□□□ -1.7
RPF2YKR081C ERG8P24521 451 aa4.42□□□□□ -1.7
RPF2YKR081C MGR1P25573 417 aa4.42□□□□□ -1.7
RPF2YKR081C RAD24P32641 659 aa4.42□□□□□ -1.7
RPF2YKR081C PDR3P33200 976 aa4.42□□□□□ -1.7
RPF2YKR081C CNS1P33313 385 aa4.42□□□□□ -1.7
RPF2YKR081C RIC1P40395 1056 aa4.42□□□□□ -1.7
RPF2YKR081C PKP1P40530 394 aa4.42□□□□□ -1.7
RPF2YKR081C HXT9P40885 567 aa4.42□□□□□ -1.7
RPF2YKR081C MAK10Q02197 733 aa4.42□□□□□ -1.7
RPF2YKR081C RSF1Q05043 376 aa4.42□□□□□ -1.7
RPF2YKR081C YLR352WQ06479 807 aa4.42□□□□□ -1.7
RPF2YKR081C PSR2Q07949 397 aa4.42□□□□□ -1.7
RPF2YKR081C SSM4P40318 1319 aa4.42□□□□□ -1.7
RPF2YKR081C EDE1P34216 1381 aa4.41□□□□□ -1.7
RPF2YKR081C YLR302CO13544 120 aa4.41□□□□□ -1.7
RPF2YKR081C CDC23P16522 626 aa4.41□□□□□ -1.7
RPF2YKR081C HNM1P19807 563 aa4.41□□□□□ -1.7
RPF2YKR081C PSY4P38193 441 aa4.41□□□□□ -1.7
RPF2YKR081C RTS2P40962 232 aa4.41□□□□□ -1.7
RPF2YKR081C SMC3P47037 1230 aa4.41□□□□□ -1.7
RPF2YKR081C YGL260WP53056 76 aa4.41□□□□□ -1.7
RPF2YKR081C GIS2P53849 153 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7 RIP-Chip
RPF2YKR081C YMR178WQ03219 274 aaKnown RBP4.41□□□□□ -1.7
RPF2YKR081C EKI1Q03764 534 aa4.41□□□□□ -1.7
RPF2YKR081C PSK2Q08217 1101 aa4.41□□□□□ -1.7
RPF2YKR081C YOR019WQ99248 730 aa4.41□□□□□ -1.7
RPF2YKR081C GAC1P28006 793 aa4.4□□□□□ -1.71
RPF2YKR081C RPN2P32565 945 aaKnown RBP4.4□□□□□ -1.71
RPF2YKR081C MRS6P32864 603 aaKnown RBP4.4□□□□□ -1.71
RPF2YKR081C PSD1P39006 500 aa4.4□□□□□ -1.71
RPF2YKR081C ATG27P46989 271 aa4.4□□□□□ -1.71
RPF2YKR081C BNA1P47096 177 aa4.4□□□□□ -1.71
RPF2YKR081C HOS2P53096 452 aaPredicted RBP4.4□□□□□ -1.71
RPF2YKR081C NNF2P53253 936 aa4.4□□□□□ -1.71
RPF2YKR081C YNR061CP53747 219 aa4.4□□□□□ -1.71
RPF2YKR081C YMR317WQ04893 1140 aa4.4□□□□□ -1.71
RPF2YKR081C SNF1P06782 633 aaKnown RBP4.39□□□□□ -1.71
RPF2YKR081C MIA40P36046 403 aa4.39□□□□□ -1.71
RPF2YKR081C IES5P40060 125 aa4.39□□□□□ -1.71
RPF2YKR081C IME4P41833 600 aa4.39□□□□□ -1.71
RPF2YKR081C DPB11P47027 764 aaPredicted RBP4.39□□□□□ -1.71
RPF2YKR081C CUL3P53202 744 aa4.39□□□□□ -1.71
RPF2YKR081C GTR1Q00582 310 aa4.39□□□□□ -1.71
RPF2YKR081C SMA1Q02651 245 aa4.39□□□□□ -1.71
RPF2YKR081C VID22Q05934 901 aa4.39□□□□□ -1.71
RPF2YKR081C YDL218WQ07629 317 aa4.39□□□□□ -1.71
RPF2YKR081C TRM8Q12009 286 aa4.39□□□□□ -1.71
RPF2YKR081C YBR085C-AO43137 85 aa4.38□□□□□ -1.71
RPF2YKR081C GID7P25569 745 aa4.38□□□□□ -1.71
RPF2YKR081C VMS1Q04311 632 aaKnown RBP4.38□□□□□ -1.71
RPF2YKR081C RCO1Q04779 684 aa4.38□□□□□ -1.71
RPF2YKR081C APL4Q12028 832 aa4.38□□□□□ -1.71
RPF2YKR081C PHO2P07269 559 aa4.37□□□□□ -1.71
RPF2YKR081C RPB2P08518 1224 aaKnown RBP4.37□□□□□ -1.71
RPF2YKR081C YKL050CP35736 922 aa4.37□□□□□ -1.71
RPF2YKR081C FMP46P36141 133 aaKnown RBP4.37□□□□□ -1.71
RPF2YKR081C PHO90P39535 881 aa4.37□□□□□ -1.71
RPF2YKR081C SEC24P40482 926 aaKnown RBP4.37□□□□□ -1.71
RPF2YKR081C YGR021WP53212 290 aa4.37□□□□□ -1.71
RPF2YKR081C ATG16Q03818 150 aa4.37□□□□□ -1.71
RPF2YKR081C YDR415CQ04033 374 aaPredicted RBP4.37□□□□□ -1.71
RPF2YKR081C BSC1Q12140 328 aa4.37□□□□□ -1.71
RPF2YKR081C ATG9Q12142 997 aa4.37□□□□□ -1.71
RPF2YKR081C INP53Q12271 1107 aa4.37□□□□□ -1.71
RPF2YKR081C BAR1P12630 587 aa4.36□□□□□ -1.71
RPF2YKR081C SEC1P30619 724 aaKnown RBP4.36□□□□□ -1.71
RPF2YKR081C SLC1P33333 303 aa4.36□□□□□ -1.71
RPF2YKR081C UIP3P39547 235 aa4.36□□□□□ -1.71
RPF2YKR081C RGI2P40188 164 aa4.36□□□□□ -1.71
RPF2YKR081C YJL070CP40361 888 aa4.36□□□□□ -1.71
RPF2YKR081C YIR014WP40570 242 aa4.36□□□□□ -1.71
RPF2YKR081C MUB1Q03162 620 aa4.36□□□□□ -1.71
RPF2YKR081C YTH1Q06102 208 aaPredicted RBP4.36□□□□□ -1.71
RPF2YKR081C NOP1P15646 327 aaKnown RBP4.35□□□□□ -1.71
RPF2YKR081C SPE2P21182 396 aa4.35□□□□□ -1.71
RPF2YKR081C TRS65P32893 560 aa4.35□□□□□ -1.71
RPF2YKR081C SNU114P36048 1008 aaKnown RBP4.35□□□□□ -1.71
RPF2YKR081C KAP123P40069 1113 aaKnown RBP4.35□□□□□ -1.71
RPF2YKR081C SLZ1P40167 298 aa4.35□□□□□ -1.71
RPF2YKR081C YIL060WP40519 144 aa4.35□□□□□ -1.71
RPF2YKR081C FET5P43561 622 aa4.35□□□□□ -1.71
RPF2YKR081C INA17Q02888 182 aa4.35□□□□□ -1.71
RPF2YKR081C ATG26Q06321 1198 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms