RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	ARC1	P46672	376 aa	Known RBP	3.76	□□□□□ -1.81
SWD2	YKL018W	VPS4	P52917	437 aa		3.76	□□□□□ -1.81
SWD2	YKL018W	DUO1	P53168	247 aa	Known RBP	3.76	□□□□□ -1.81
SWD2	YKL018W	RCO1	Q04779	684 aa		3.76	□□□□□ -1.81
SWD2	YKL018W	PDR8	Q06149	701 aa		3.76	□□□□□ -1.81
SWD2	YKL018W	ENT4	Q07872	247 aa		3.76	□□□□□ -1.81
SWD2	YKL018W	RPB2	P08518	1224 aa	Known RBP	3.75	□□□□□ -1.81
SWD2	YKL018W	SUI3	P09064	285 aa	Known RBP	3.75	□□□□□ -1.81
SWD2	YKL018W	FUR1	P18562	216 aa	Known RBP	3.75	□□□□□ -1.81
SWD2	YKL018W	ERG8	P24521	451 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	SGF29	P25554	259 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	URK1	P27515	501 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	YBL029W	P38201	376 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	PSD1	P39006	500 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	YAT2	P40017	923 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	SIP4	P46954	829 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	YGR079W	P53249	370 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	MRPL19	P53875	158 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	YSA1	Q01976	231 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	FCP1	Q03254	732 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	RAD30	Q04049	632 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	VIP1	Q06685	1146 aa	Known RBP	3.75	□□□□□ -1.81
SWD2	YKL018W	RLP24	Q07915	199 aa	Known RBP	3.75	□□□□□ -1.81
SWD2	YKL018W	SWT1	Q12104	458 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	YBR126W-A	Q8TGU7	68 aa		3.75	□□□□□ -1.81
SWD2	YKL018W	SEC53	P07283	254 aa	Known RBP	3.74	□□□□□ -1.81
SWD2	YKL018W	TFC3	P34111	1160 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	ALY1	P36117	915 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	ESL2	P36168	1195 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	FMP10	P40098	244 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	SGM1	P47166	707 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	UBP8	P50102	471 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	YPR003C	P53394	754 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	RPT6	Q01939	405 aa	Known RBP	3.74	□□□□□ -1.81
SWD2	YKL018W	YKU80	Q04437	629 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	MFB1	Q04922	465 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	YLR287C	Q05881	355 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	GSH2	Q08220	491 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	MCH4	Q08268	501 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	HSH49	Q99181	213 aa	Predicted RBP	3.74	□□□□□ -1.81
SWD2	YKL018W	VCX1	Q99385	411 aa		3.74	□□□□□ -1.81
SWD2	YKL018W	MON2	P48563	1636 aa	Predicted RBP	3.73	□□□□□ -1.81
SWD2	YKL018W	GCN4	P03069	281 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	RPL19A	P0CX82	189 aa	Known RBP	3.73	□□□□□ -1.81
SWD2	YKL018W	RPL19B	P0CX83	189 aa	Predicted RBP	3.73	□□□□□ -1.81
SWD2	YKL018W	YCR006C	P25350	157 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	LRE1	P25579	583 aa	Known RBP	3.73	□□□□□ -1.81
SWD2	YKL018W	NFU1	P32860	256 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	OCT1	P35999	772 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	YBR225W	P38321	900 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	UBP7	P40453	1071 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	IRC6	P43615	237 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	GTB1	Q04924	702 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	ARP9	Q05123	467 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	YMR034C	Q05131	434 aa	Predicted RBP	3.73	□□□□□ -1.81
SWD2	YKL018W	ATG23	Q06671	453 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	GRS2	Q06817	618 aa		3.73	□□□□□ -1.81
SWD2	YKL018W	OLE1	P21147	510 aa	Known RBP	3.72	□□□□□ -1.81
SWD2	YKL018W	CDC15	P27636	974 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	PEP3	P27801	918 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	HES1	P35843	434 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	YIL169C	P40442	995 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	ARF3	P40994	183 aa	RIP-Chip data	3.72	□□□□□ -1.81	not detected
SWD2	YKL018W	SAD1	P43589	448 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	AAD10	P47182	288 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	SYF1	Q04048	859 aa	Predicted RBP	3.72	□□□□□ -1.81
SWD2	YKL018W	PSK2	Q08217	1101 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	SCM3	Q12334	223 aa		3.72	□□□□□ -1.81
SWD2	YKL018W	NOP58	Q12499	511 aa	Known RBP	3.72	□□□□□ -1.81
SWD2	YKL018W	YCK1	P23291	538 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	RFA2	P26754	273 aa	Known RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	ARC40	P38328	384 aa	Known RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	RTS1	P38903	757 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	MET30	P39014	640 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	BUD16	P39988	312 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	SLZ1	P40167	298 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	DSD1	P53095	428 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	YGL036W	P53185	909 aa	Predicted RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	ARE2	P53629	642 aa	Known RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	MUB1	Q03162	620 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	TAF11	Q04226	346 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	RIX7	Q07844	837 aa	Known RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	MLH2	Q07980	695 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	RCN2	Q12044	265 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	YLR049C	Q12110	428 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	RRG1	Q12167	365 aa	Predicted RBP	3.71	□□□□□ -1.82
SWD2	YKL018W	YOR019W	Q99248	730 aa		3.71	□□□□□ -1.82
SWD2	YKL018W	YML003W	P0CF16	290 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	RPL42A	P0CX27	106 aa	Known RBP	3.7	□□□□□ -1.82
SWD2	YKL018W	RPL42B	P0CX28	106 aa	Known RBP	3.7	□□□□□ -1.82
SWD2	YKL018W	MRP2	P10663	115 aa	Predicted RBP	3.7	□□□□□ -1.82
SWD2	YKL018W	RED1	P14291	827 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	YCR043C	P25361	127 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	SRB5	P32585	307 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	RGT1	P32862	1170 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	RPS0A	P32905	252 aa	Known RBP	3.7	□□□□□ -1.82
SWD2	YKL018W	TPA1	P40032	644 aa	Known RBP	3.7	□□□□□ -1.82
SWD2	YKL018W	YIL152W	P40455	235 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	DJP1	P40564	432 aa		3.7	□□□□□ -1.82
SWD2	YKL018W	TES1	P41903	349 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms