RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	SPC105	P53148	917 aa		3.77	□□□□□ -1.81
SGN1	YIR001C	POB3	Q04636	552 aa	Known RBP	3.77	□□□□□ -1.81
SGN1	YIR001C	YDR061W	Q12298	539 aa		3.77	□□□□□ -1.81
SGN1	YIR001C	BI3	Q9ZZW7	517 aa		3.77	□□□□□ -1.81
SGN1	YIR001C	SPS1	P08458	490 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	SCH9	P11792	824 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	PCT1	P13259	424 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	TRX1	P22217	103 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	PTP1	P25044	335 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	AIM26	P32858	118 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	TFC3	P34111	1160 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	JNM1	P36224	373 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	SRP72	P38688	640 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	YIR014W	P40570	242 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	MKT1	P40850	830 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	DLD2	P46681	530 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	TCB2	P48231	1178 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	TRF5	P48561	642 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	VAC7	P53950	1165 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	REG1	Q00816	1014 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	YDR131C	Q03899	556 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	ARG7	Q04728	441 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	SEC39	Q12745	709 aa		3.76	□□□□□ -1.81
SGN1	YIR001C	EFG1	Q3E705	233 aa	Known RBP	3.76	□□□□□ -1.81
SGN1	YIR001C	INH1	P01097	85 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	CLC1	P17891	233 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	GAS1	P22146	559 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	PPH21	P23594	369 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	MRS6	P32864	603 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	PET112	P33893	541 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	MIC60	P36112	540 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	BIT2	P38346	545 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	SMF1	P38925	575 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	STN1	P38960	494 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	TMN3	P40071	706 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	SEC26	P41810	973 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	ALR2	P43553	858 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	CTK3	P46963	296 aa	Predicted RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	YGR111W	P53265	400 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	YNL247W	P53852	767 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	YNL143C	P53908	130 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	SUR7	P54003	302 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	TGL2	P54857	326 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	EGD1	Q02642	157 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	SIZ1	Q04195	904 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	YDR222W	Q04925	415 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	KAP95	Q06142	861 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	SWC7	Q06707	132 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	PGC1	Q08959	321 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	GPM3	Q12326	303 aa		3.75	□□□□□ -1.81
SGN1	YIR001C	CYR1	P08678	2026 aa	Known RBP	3.75	□□□□□ -1.81
SGN1	YIR001C	TUB1	P09733	447 aa	Known RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	CDC34	P14682	295 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	EST1	P17214	699 aa	Predicted RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	CLN2	P20438	545 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	RBK1	P25332	333 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	SEC65	P29478	273 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	ALY1	P36117	915 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	SMC2	P38989	1170 aa	Known RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	ERP2	P39704	215 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	ZIM17	P42844	174 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	YFR018C	P43599	363 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	RRT5	P43607	289 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	ROK1	P45818	564 aa	Predicted RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	SET2	P46995	733 aa	Known RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	RIM8	P53179	542 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	SWC4	P53201	476 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	YGR127W	P53275	312 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	IPI3	P53877	555 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	MRPL22	P53881	309 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	TEP1	P53916	434 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	YNL040W	P53960	456 aa	Predicted RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	VPS9	P54787	451 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	UFO1	Q04511	668 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	ERV41	Q04651	352 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	GSF2	Q04697	403 aa	Known RBP	3.74	□□□□□ -1.81
SGN1	YIR001C	YLR287C	Q05881	355 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	CDA2	Q06703	312 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	TPO1	Q07824	586 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	TRM8	Q12009	286 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	YOR338W	Q99326	363 aa		3.74	□□□□□ -1.81
SGN1	YIR001C	YPR089W	O13585	888 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	MPH2	P0CD99	609 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	TUP1	P16649	713 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	PRP6	P19735	899 aa	Predicted RBP	3.73	□□□□□ -1.81
SGN1	YIR001C	UBA1	P22515	1024 aa	Known RBP	3.73	□□□□□ -1.81
SGN1	YIR001C	AAT2	P23542	418 aa	Known RBP	3.73	□□□□□ -1.81
SGN1	YIR001C	RNQ1	P25367	405 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	LYP1	P32487	611 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	SPR1	P32603	445 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	CYM1	P32898	989 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	YKL050C	P35736	922 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	YBR259W	P38338	688 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	CCT6	P39079	546 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	YAL037W	P39728	267 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	FAU1	P40099	211 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	KHA1	P40309	873 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	CFD1	P40558	293 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	MPH1	P40562	993 aa		3.73	□□□□□ -1.81
SGN1	YIR001C	ALK1	P43633	760 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms