RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W LPX1Q12405 387 aaKnown RBP5.4□□□□□ -1.54
PDE1YGL248W TFB5Q3E7C1 72 aaPredicted RBP5.4□□□□□ -1.54
PDE1YGL248W ARO3P14843 370 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W PRP2P20095 876 aaPredicted RBP5.39□□□□□ -1.55
PDE1YGL248W SWI4P25302 1093 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W MRP20P32387 263 aa5.39□□□□□ -1.55
PDE1YGL248W SEF1P34228 1148 aa5.39□□□□□ -1.55
PDE1YGL248W RSM22P36056 628 aa5.39□□□□□ -1.55
PDE1YGL248W ATP3P38077 311 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W MAK5P38112 773 aaPredicted RBP5.39□□□□□ -1.55
PDE1YGL248W REG2P38232 338 aa5.39□□□□□ -1.55
PDE1YGL248W PTC7P38797 343 aa5.39□□□□□ -1.55
PDE1YGL248W RLP7P40693 322 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W YFR018CP43599 363 aa5.39□□□□□ -1.55
PDE1YGL248W IMA1P53051 589 aa5.39□□□□□ -1.55
PDE1YGL248W RAD30Q04049 632 aa5.39□□□□□ -1.55
PDE1YGL248W CSI1Q04368 295 aa5.39□□□□□ -1.55
PDE1YGL248W ENT4Q07872 247 aa5.39□□□□□ -1.55
PDE1YGL248W RSB1Q08417 382 aa5.39□□□□□ -1.55
PDE1YGL248W VIK1Q12045 647 aa5.39□□□□□ -1.55
PDE1YGL248W LYS21Q12122 440 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W LEU9Q12166 604 aaKnown RBP5.39□□□□□ -1.55
PDE1YGL248W YDR061WQ12298 539 aa5.39□□□□□ -1.55
PDE1YGL248W GIS3Q12418 502 aa5.39□□□□□ -1.55
PDE1YGL248W LAG2Q92325 660 aa5.39□□□□□ -1.55
PDE1YGL248W DIF1O13577 133 aa5.38□□□□□ -1.55
PDE1YGL248W ARG80P07249 177 aa5.38□□□□□ -1.55
PDE1YGL248W PCK1P10963 549 aa5.38□□□□□ -1.55
PDE1YGL248W GLN4P13188 809 aaKnown RBP5.38□□□□□ -1.55
PDE1YGL248W CKA2P19454 339 aa5.38□□□□□ -1.55
PDE1YGL248W RIT1P23796 513 aa5.38□□□□□ -1.55
PDE1YGL248W CRM1P30822 1084 aaKnown RBP5.38□□□□□ -1.55
PDE1YGL248W CST26P38226 397 aa5.38□□□□□ -1.55
PDE1YGL248W SSO2P39926 295 aa5.38□□□□□ -1.55
PDE1YGL248W RTR1P40084 226 aaPredicted RBP5.38□□□□□ -1.55
PDE1YGL248W IST3P40565 148 aaPredicted RBP5.38□□□□□ -1.55
PDE1YGL248W BST1P43571 1029 aa5.38□□□□□ -1.55
PDE1YGL248W SMC3P47037 1230 aa5.38□□□□□ -1.55
PDE1YGL248W HXT16P47185 567 aa5.38□□□□□ -1.55
PDE1YGL248W TOM22P49334 152 aa5.38□□□□□ -1.55
PDE1YGL248W GLO1P50107 326 aa5.38□□□□□ -1.55
PDE1YGL248W RPM2Q02773 1202 aa5.38□□□□□ -1.55
PDE1YGL248W CLU1Q03690 1277 aaKnown RBP5.38□□□□□ -1.55
PDE1YGL248W THI22Q06490 572 aa5.38□□□□□ -1.55
PDE1YGL248W HOS1Q12214 470 aa5.38□□□□□ -1.55
PDE1YGL248W YML133CQ03099 1374 aa5.38□□□□□ -1.55
PDE1YGL248W YLL066CQ99208 1374 aa5.38□□□□□ -1.55
PDE1YGL248W DFR1P07807 211 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
PDE1YGL248W RSR1P13856 272 aa5.37□□□□□ -1.55
PDE1YGL248W CDC26P14724 124 aa5.37□□□□□ -1.55
PDE1YGL248W GID7P25569 745 aa5.37□□□□□ -1.55
PDE1YGL248W AFG1P32317 509 aa5.37□□□□□ -1.55
PDE1YGL248W ALG3P38179 458 aa5.37□□□□□ -1.55
PDE1YGL248W PET100P38958 111 aa5.37□□□□□ -1.55
PDE1YGL248W MAD2P40958 196 aa5.37□□□□□ -1.55
PDE1YGL248W YGR066CP53242 292 aa5.37□□□□□ -1.55
PDE1YGL248W YGR067CP53243 804 aa5.37□□□□□ -1.55
PDE1YGL248W RRP46P53256 223 aaPredicted RBP5.37□□□□□ -1.55
PDE1YGL248W NOG2P53742 486 aaKnown RBP5.37□□□□□ -1.55
PDE1YGL248W NOP15P53927 220 aaPredicted RBP5.37□□□□□ -1.55
PDE1YGL248W KAP120Q02932 1032 aa5.37□□□□□ -1.55
PDE1YGL248W RSN1Q03516 953 aa5.37□□□□□ -1.55
PDE1YGL248W UFO1Q04511 668 aa5.37□□□□□ -1.55
PDE1YGL248W SOV1Q04748 898 aa5.37□□□□□ -1.55
PDE1YGL248W CRD1Q07560 283 aa5.37□□□□□ -1.55
PDE1YGL248W AAD4Q07747 329 aa5.37□□□□□ -1.55
PDE1YGL248W DSE3Q08729 430 aa5.37□□□□□ -1.55
PDE1YGL248W RTK1Q12100 620 aaPredicted RBP5.37□□□□□ -1.55
PDE1YGL248W YJR112W-AQ3E743 109 aa5.37□□□□□ -1.55
PDE1YGL248W ISN1Q99312 450 aa5.37□□□□□ -1.55
PDE1YGL248W TEF1P02994 458 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W STE3P06783 470 aa5.36□□□□□ -1.55
PDE1YGL248W PET494P07390 489 aaPredicted RBP5.36□□□□□ -1.55
PDE1YGL248W SEN2P16658 377 aa5.36□□□□□ -1.55
PDE1YGL248W YPK2P18961 677 aa5.36□□□□□ -1.55
PDE1YGL248W IMG2P25642 146 aaPredicted RBP5.36□□□□□ -1.55
PDE1YGL248W SYN8P31377 255 aa5.36□□□□□ -1.55
PDE1YGL248W AFG2P32794 780 aa5.36□□□□□ -1.55
PDE1YGL248W RRP1P35178 278 aaPredicted RBP5.36□□□□□ -1.55
PDE1YGL248W THI80P35202 319 aa5.36□□□□□ -1.55
PDE1YGL248W KES1P35844 434 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W YKR051WP36142 418 aa5.36□□□□□ -1.55
PDE1YGL248W YKR078WP36158 585 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W UBP13P38187 747 aa5.36□□□□□ -1.55
PDE1YGL248W KSP1P38691 1029 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W ERC1P38767 581 aa5.36□□□□□ -1.55
PDE1YGL248W SMF2P38778 549 aa5.36□□□□□ -1.55
PDE1YGL248W YER085CP40058 173 aa5.36□□□□□ -1.55
PDE1YGL248W YTA12P40341 825 aa5.36□□□□□ -1.55
PDE1YGL248W CAB2P40506 365 aa5.36□□□□□ -1.55
PDE1YGL248W GTS1P40956 396 aa5.36□□□□□ -1.55
PDE1YGL248W DLD2P46681 530 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W HSH155P49955 971 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W YGL138CP53122 345 aa5.36□□□□□ -1.55
PDE1YGL248W YNL143CP53908 130 aa5.36□□□□□ -1.55
PDE1YGL248W HDA1P53973 706 aa5.36□□□□□ -1.55
PDE1YGL248W RSM28Q03430 361 aa5.36□□□□□ -1.55
PDE1YGL248W TPP1Q03796 238 aa5.36□□□□□ -1.55
PDE1YGL248W ARX1Q03862 593 aaKnown RBP5.36□□□□□ -1.55
PDE1YGL248W RPN9Q04062 393 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms