RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C IMG2P25642 146 aaPredicted RBP3.3□□□□□ -1.88
XRN1YGL173C MRPL40P36534 297 aa3.3□□□□□ -1.88
XRN1YGL173C YHL012WP38709 493 aa3.3□□□□□ -1.88
XRN1YGL173C MAM1P40065 302 aa3.3□□□□□ -1.88
XRN1YGL173C AMA1P50082 593 aa3.3□□□□□ -1.88
XRN1YGL173C PSP2P50109 593 aaKnown RBP3.3□□□□□ -1.88
XRN1YGL173C SLG1P54867 378 aa3.3□□□□□ -1.88
XRN1YGL173C PUS5Q06244 254 aa3.3□□□□□ -1.88
XRN1YGL173C PSY3Q12318 242 aa3.3□□□□□ -1.88
XRN1YGL173C YPT6Q99260 215 aa3.3□□□□□ -1.88
XRN1YGL173C GPM1P00950 247 aaKnown RBP3.3□□□□□ -1.88
XRN1YGL173C YCK1P23291 538 aa3.3□□□□□ -1.88
XRN1YGL173C BUD5P25300 642 aaPredicted RBP3.3□□□□□ -1.88
XRN1YGL173C YHR078WP38799 552 aa3.3□□□□□ -1.88
XRN1YGL173C YIL077CP40508 320 aa3.3□□□□□ -1.88
XRN1YGL173C ECM27P47144 725 aa3.3□□□□□ -1.88
XRN1YGL173C GCV2P49095 1034 aa3.3□□□□□ -1.88
XRN1YGL173C DCP2P53550 970 aaKnown RBP3.3□□□□□ -1.88
XRN1YGL173C RSF1Q05043 376 aa3.3□□□□□ -1.88
XRN1YGL173C NTO1Q12311 748 aa3.3□□□□□ -1.88
XRN1YGL173C FAS2P19097 1887 aaKnown RBP3.3□□□□□ -1.88
XRN1YGL173C SPE1P08432 466 aa3.29□□□□□ -1.88
XRN1YGL173C TUB3P09734 445 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C YML003WP0CF16 290 aa3.29□□□□□ -1.88
XRN1YGL173C STE12P13574 688 aa3.29□□□□□ -1.88
XRN1YGL173C SRP54P20424 541 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C YIH1P25637 258 aa3.29□□□□□ -1.88
XRN1YGL173C PHO91P27514 894 aa3.29□□□□□ -1.88
XRN1YGL173C SAP30P38429 201 aa3.29□□□□□ -1.88
XRN1YGL173C SAK1P38990 1142 aa3.29□□□□□ -1.88
XRN1YGL173C ROG3P43602 733 aa3.29□□□□□ -1.88
XRN1YGL173C MNT4P53745 580 aa3.29□□□□□ -1.88
XRN1YGL173C GIM3P53900 129 aa3.29□□□□□ -1.88
XRN1YGL173C REG1Q00816 1014 aa3.29□□□□□ -1.88
XRN1YGL173C DIB1Q06819 143 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C NSE1Q07913 336 aa3.29□□□□□ -1.88
XRN1YGL173C ULA1Q12059 462 aa3.29□□□□□ -1.88
XRN1YGL173C BMT6Q12291 365 aa3.29□□□□□ -1.88
XRN1YGL173C MSP1P28737 362 aa3.29□□□□□ -1.88
XRN1YGL173C SUR1P33300 382 aa3.29□□□□□ -1.88
XRN1YGL173C CBF5P33322 483 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
XRN1YGL173C SIF2P38262 535 aa3.29□□□□□ -1.88
XRN1YGL173C MTG2P38860 518 aa3.29□□□□□ -1.88
XRN1YGL173C RPS15Q01855 142 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C SKG3Q06315 1026 aa3.29□□□□□ -1.88
XRN1YGL173C CIR2Q08822 631 aa3.29□□□□□ -1.88
XRN1YGL173C HAL9Q12180 1030 aa3.29□□□□□ -1.88
XRN1YGL173C YVC1Q12324 675 aa3.29□□□□□ -1.88
XRN1YGL173C ISA2Q12425 185 aa3.29□□□□□ -1.88
XRN1YGL173C CBS1P14066 229 aa3.29□□□□□ -1.88
XRN1YGL173C SEC18P18759 758 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C RFA1P22336 621 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C PDE1P22434 369 aa3.29□□□□□ -1.88
XRN1YGL173C STE11P23561 717 aa3.29□□□□□ -1.88
XRN1YGL173C RRP7P25368 297 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C MSS1P32559 526 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C HES1P35843 434 aa3.29□□□□□ -1.88
XRN1YGL173C UBS1P38290 277 aa3.29□□□□□ -1.88
XRN1YGL173C ERC1P38767 581 aa3.29□□□□□ -1.88
XRN1YGL173C BZZ1P38822 633 aa3.29□□□□□ -1.88
XRN1YGL173C EAF5P39995 279 aa3.29□□□□□ -1.88
XRN1YGL173C LTP1P40347 161 aa3.29□□□□□ -1.88
XRN1YGL173C YAR1P46683 200 aa3.29□□□□□ -1.88
XRN1YGL173C CTH1P47976 325 aa3.29□□□□□ -1.88
XRN1YGL173C PRP43P53131 767 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C YGR012WP53206 393 aa3.29□□□□□ -1.88
XRN1YGL173C YGR127WP53275 312 aa3.29□□□□□ -1.88
XRN1YGL173C NAM8Q00539 523 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C VTC3Q02725 835 aa3.29□□□□□ -1.88
XRN1YGL173C OAZ1Q02803 292 aa3.29□□□□□ -1.88
XRN1YGL173C THI22Q06490 572 aa3.29□□□□□ -1.88
XRN1YGL173C ISA1Q07821 250 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C RCL1Q08096 367 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C GPB1Q08886 897 aa3.29□□□□□ -1.88
XRN1YGL173C LEA1Q08963 238 aaPredicted RBP3.29□□□□□ -1.88
XRN1YGL173C HIS5P07172 385 aa3.29□□□□□ -1.88
XRN1YGL173C CBP1P07252 654 aa3.29□□□□□ -1.88
XRN1YGL173C CDC6P09119 513 aa3.29□□□□□ -1.88
XRN1YGL173C PYC1P11154 1178 aaKnown RBP3.29□□□□□ -1.88
XRN1YGL173C RIB7P33312 244 aa3.29□□□□□ -1.88
XRN1YGL173C YEL057CP39983 233 aa3.29□□□□□ -1.88
XRN1YGL173C MSY1P48527 492 aa3.29□□□□□ -1.88
XRN1YGL173C CUZ1P53899 274 aa3.29□□□□□ -1.88
XRN1YGL173C YPL107WQ02873 248 aa3.29□□□□□ -1.88
XRN1YGL173C CUR1Q06469 252 aa3.29□□□□□ -1.88
XRN1YGL173C RDR1Q08904 546 aa3.29□□□□□ -1.88
XRN1YGL173C YML002WP0CF17 737 aa3.28□□□□□ -1.88
XRN1YGL173C PHO84P25297 587 aaKnown RBP3.28□□□□□ -1.88
XRN1YGL173C RFC5P38251 354 aa3.28□□□□□ -1.88
XRN1YGL173C MCX1P38323 520 aaPredicted RBP3.28□□□□□ -1.88
XRN1YGL173C PEX18P38855 283 aa3.28□□□□□ -1.88
XRN1YGL173C ZRG8P40021 1076 aa3.28□□□□□ -1.88
XRN1YGL173C MCM6P53091 1017 aaKnown RBP3.28□□□□□ -1.88
XRN1YGL173C VPS62P53285 467 aa3.28□□□□□ -1.88
XRN1YGL173C GCR2Q01722 534 aa3.28□□□□□ -1.88
XRN1YGL173C YMR155WQ03795 547 aa3.28□□□□□ -1.88
XRN1YGL173C VPS54Q12071 889 aa3.28□□□□□ -1.88
XRN1YGL173C TFB5Q3E7C1 72 aaPredicted RBP3.28□□□□□ -1.88
XRN1YGL173C MHP1P43638 1398 aa3.28□□□□□ -1.88
XRN1YGL173C PUP3P25451 205 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms