RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene KXD1, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KXD1	YGL079W	ASI1	P54074	624 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	GTR1	Q00582	310 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	REG1	Q00816	1014 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	ECI1	Q05871	280 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	VCX1	Q99385	411 aa		4.12	□□□□□ -1.75
KXD1	YGL079W	RAP1	P11938	827 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
KXD1	YGL079W	PSY4	P38193	441 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	UME6	P39001	836 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	ESBP6	P53918	673 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	MDM1	Q01846	1127 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	RSM28	Q03430	361 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	YLR281C	Q05863	155 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	SSM4	P40318	1319 aa		4.11	□□□□□ -1.75
KXD1	YGL079W	TKL1	P23254	680 aa	Known RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	GFD2	P25370	566 aa	Known RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	CNS1	P33313	385 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	JNM1	P36224	373 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	LEU5	P38702	357 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	RTT107	P38850	1070 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	VRG4	P40107	337 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	RPN11	P43588	306 aa	Known RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	BNA1	P47096	177 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	HOS2	P53096	452 aa	Predicted RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	YML131W	Q03102	365 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	VID22	Q05934	901 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	YTH1	Q06102	208 aa	Predicted RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	MCP2	Q06567	569 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	GPN2	Q08726	347 aa	Predicted RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	APL5	Q08951	932 aa	Known RBP	4.1	□□□□□ -1.75
KXD1	YGL079W	RTP1	Q12751	981 aa		4.1	□□□□□ -1.75
KXD1	YGL079W	ERG8	P24521	451 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	CDC15	P27636	974 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	SAC1	P32368	623 aa	Known RBP	4.09	□□□□□ -1.75
KXD1	YGL079W	RKM3	P38222	552 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	EFM2	P38347	419 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	RIC1	P40395	1056 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	SAD1	P43589	448 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	YFR020W	P43600	232 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	FMP42	Q04991	504 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	UTP21	Q06078	939 aa	Predicted RBP	4.09	□□□□□ -1.75
KXD1	YGL079W	TRM8	Q12009	286 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	ERP4	Q12450	207 aa		4.09	□□□□□ -1.75
KXD1	YGL079W	YLR302C	O13544	120 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	SNF1	P06782	633 aa	Known RBP	4.08	□□□□□ -1.76
KXD1	YGL079W	CBP1	P07252	654 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	PPZ1	P26570	692 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	PSD1	P39006	500 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	IML2	P47031	731 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	VPS4	P52917	437 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	YGL260W	P53056	76 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	SGF73	P53165	657 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	YTP1	P53584	459 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	YMR317W	Q04893	1140 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	PSK2	Q08217	1101 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	YOR019W	Q99248	730 aa		4.08	□□□□□ -1.76
KXD1	YGL079W	INH1	P01097	85 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	CLB2	P24869	491 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	ESL2	P36168	1195 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	RFC1	P38630	861 aa	Known RBP	4.07	□□□□□ -1.76
KXD1	YGL079W	YNR061C	P53747	219 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	IST1	P53843	298 aa	Predicted RBP	4.07	□□□□□ -1.76
KXD1	YGL079W	YNL181W	P53878	407 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	YMR254C	Q04838	102 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	OPY2	Q06810	360 aa		4.07	□□□□□ -1.76
KXD1	YGL079W	HXK2	P04807	486 aa	Known RBP	4.06	□□□□□ -1.76
KXD1	YGL079W	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	GUK1	P15454	187 aa	Known RBP	4.06	□□□□□ -1.76
KXD1	YGL079W	NFU1	P32860	256 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	SLC1	P33333	303 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	STV1	P37296	890 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	SRB7	P47822	140 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	YNL234W	P53857	426 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	ARP10	Q04549	284 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	SSP2	Q08646	371 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	NUS1	Q12063	375 aa		4.06	□□□□□ -1.76
KXD1	YGL079W	RPB2	P08518	1224 aa	Known RBP	4.05	□□□□□ -1.76
KXD1	YGL079W	KRS1	P15180	591 aa	Known RBP	4.05	□□□□□ -1.76
KXD1	YGL079W	CDC23	P16522	626 aa		4.05	□□□□□ -1.76
KXD1	YGL079W	BZZ1	P38822	633 aa		4.05	□□□□□ -1.76
KXD1	YGL079W	PKP1	P40530	394 aa		4.05	□□□□□ -1.76
KXD1	YGL079W	NNF2	P53253	936 aa		4.05	□□□□□ -1.76
KXD1	YGL079W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
KXD1	YGL079W	CTL1	Q03220	320 aa	Known RBP	4.05	□□□□□ -1.76
KXD1	YGL079W	TSR2	Q06672	205 aa	Known RBP	4.05	□□□□□ -1.76
KXD1	YGL079W	YOL087C	Q99247	1116 aa		4.05	□□□□□ -1.76
KXD1	YGL079W	EDE1	P34216	1381 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	CHS3	P29465	1165 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	MCM10	P32354	571 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	MRP20	P32387	263 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	FMP46	P36141	133 aa	Known RBP	4.04	□□□□□ -1.76
KXD1	YGL079W	KAP123	P40069	1113 aa	Known RBP	4.04	□□□□□ -1.76
KXD1	YGL079W	SEC24	P40482	926 aa	Known RBP	4.04	□□□□□ -1.76
KXD1	YGL079W	HXT9	P40885	567 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	IME4	P41833	600 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	MAK10	Q02197	733 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	RCO1	Q04779	684 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	YMR230W-A	Q3E7B5	62 aa		4.04	□□□□□ -1.76
KXD1	YGL079W	YBR085C-A	O43137	85 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms