RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W COQ3P27680 312 aa3.52□□□□□ -1.85
SEC4YFL005W AUR1P36107 401 aaPredicted RBP3.52□□□□□ -1.85
SEC4YFL005W AGP2P38090 596 aa3.52□□□□□ -1.85
SEC4YFL005W MAL33P38157 468 aa3.52□□□□□ -1.85
SEC4YFL005W DIA4P38705 446 aaPredicted RBP3.52□□□□□ -1.85
SEC4YFL005W UIP3P39547 235 aa3.52□□□□□ -1.85
SEC4YFL005W FLC2P39719 783 aa3.52□□□□□ -1.85
SEC4YFL005W PKP1P40530 394 aa3.52□□□□□ -1.85
SEC4YFL005W SMC3P47037 1230 aa3.52□□□□□ -1.85
SEC4YFL005W ERG13P54839 491 aaKnown RBP3.52□□□□□ -1.85
SEC4YFL005W RSC9Q03124 581 aa3.52□□□□□ -1.85
SEC4YFL005W TSR2Q06672 205 aaKnown RBP3.52□□□□□ -1.85
SEC4YFL005W SDH5Q08230 162 aa3.52□□□□□ -1.85
SEC4YFL005W MCH4Q08268 501 aa3.52□□□□□ -1.85
SEC4YFL005W CHO1P08456 276 aa3.51□□□□□ -1.85
SEC4YFL005W YMR085WP0CF18 432 aa3.51□□□□□ -1.85
SEC4YFL005W OLE1P21147 510 aaKnown RBP3.51□□□□□ -1.85
SEC4YFL005W PWP1P21304 576 aaKnown RBP3.51□□□□□ -1.85
SEC4YFL005W TKL1P23254 680 aaKnown RBP3.51□□□□□ -1.85
SEC4YFL005W VMA16P23968 213 aa3.51□□□□□ -1.85
SEC4YFL005W SGF29P25554 259 aa3.51□□□□□ -1.85
SEC4YFL005W CMK1P27466 446 aaKnown RBP3.51□□□□□ -1.85
SEC4YFL005W BUR6P40096 142 aa3.51□□□□□ -1.85
SEC4YFL005W YFR020WP43600 232 aa3.51□□□□□ -1.85
SEC4YFL005W UBP8P50102 471 aa3.51□□□□□ -1.85
SEC4YFL005W PFA5Q03289 374 aa3.51□□□□□ -1.85
SEC4YFL005W ATG9Q12142 997 aa3.51□□□□□ -1.85
SEC4YFL005W INP53Q12271 1107 aa3.51□□□□□ -1.85
SEC4YFL005W YER145C-AA0A023PYF4 145 aa3.5□□□□□ -1.85
SEC4YFL005W GPA1P08539 472 aa3.5□□□□□ -1.85
SEC4YFL005W RAP1P11938 827 aa3.5□□□□□ -1.85
SEC4YFL005W MRP7P12687 371 aa3.5□□□□□ -1.85
SEC4YFL005W KAR3P17119 729 aa3.5□□□□□ -1.85
SEC4YFL005W SPE2P21182 396 aa3.5□□□□□ -1.85
SEC4YFL005W STE50P25344 346 aa3.5□□□□□ -1.85
SEC4YFL005W SAC1P32368 623 aaKnown RBP3.5□□□□□ -1.85
SEC4YFL005W SNU114P36048 1008 aaKnown RBP3.5□□□□□ -1.85
SEC4YFL005W VPS41P38959 992 aa3.5□□□□□ -1.85
SEC4YFL005W LTP1P40347 161 aa3.5□□□□□ -1.85
SEC4YFL005W ESL1P40456 1118 aa3.5□□□□□ -1.85
SEC4YFL005W ULP2P40537 1034 aaPredicted RBP3.5□□□□□ -1.85
SEC4YFL005W LYS4P49367 693 aaPredicted RBP3.5□□□□□ -1.85
SEC4YFL005W STR3P53101 465 aaKnown RBP3.5□□□□□ -1.85
SEC4YFL005W COP1P53622 1201 aaKnown RBP3.5□□□□□ -1.85
SEC4YFL005W EAF7P53911 425 aaKnown RBP3.5□□□□□ -1.85
SEC4YFL005W MDM1Q01846 1127 aa3.5□□□□□ -1.85
SEC4YFL005W SWF1Q04629 336 aa3.5□□□□□ -1.85
SEC4YFL005W YPL272CQ08984 517 aa3.5□□□□□ -1.85
SEC4YFL005W PFA4Q12006 378 aa3.5□□□□□ -1.85
SEC4YFL005W RGT2Q12300 763 aa3.5□□□□□ -1.85
SEC4YFL005W INH1P01097 85 aa3.49□□□□□ -1.85
SEC4YFL005W GCN4P03069 281 aa3.49□□□□□ -1.85
SEC4YFL005W MET8P15807 274 aa3.49□□□□□ -1.85
SEC4YFL005W CNA1P23287 553 aa3.49□□□□□ -1.85
SEC4YFL005W ADH7P25377 361 aa3.49□□□□□ -1.85
SEC4YFL005W POL4P25615 582 aa3.49□□□□□ -1.85
SEC4YFL005W RGT1P32862 1170 aa3.49□□□□□ -1.85
SEC4YFL005W YKL050CP35736 922 aa3.49□□□□□ -1.85
SEC4YFL005W PXL1P36166 706 aa3.49□□□□□ -1.85
SEC4YFL005W YBR225WP38321 900 aa3.49□□□□□ -1.85
SEC4YFL005W TOM71P38825 639 aaKnown RBP3.49□□□□□ -1.85
SEC4YFL005W NDE1P40215 560 aa3.49□□□□□ -1.85
SEC4YFL005W CFD1P40558 293 aa3.49□□□□□ -1.85
SEC4YFL005W NET1P47035 1189 aa3.49□□□□□ -1.85
SEC4YFL005W DIA3P52290 468 aa3.49□□□□□ -1.85
SEC4YFL005W NNF2P53253 936 aa3.49□□□□□ -1.85
SEC4YFL005W RBG2P53295 368 aaKnown RBP3.49□□□□□ -1.85
SEC4YFL005W VTC3Q02725 835 aa3.49□□□□□ -1.85
SEC4YFL005W NGL3Q03210 505 aa3.49□□□□□ -1.85
SEC4YFL005W YMR178WQ03219 274 aaKnown RBP3.49□□□□□ -1.85
SEC4YFL005W ARP9Q05123 467 aa3.49□□□□□ -1.85
SEC4YFL005W CTI6Q08923 506 aa3.49□□□□□ -1.85
SEC4YFL005W APL4Q12028 832 aa3.49□□□□□ -1.85
SEC4YFL005W RCN2Q12044 265 aa3.49□□□□□ -1.85
SEC4YFL005W CRC1Q12289 327 aa3.49□□□□□ -1.85
SEC4YFL005W RRI1Q12468 440 aa3.49□□□□□ -1.85
SEC4YFL005W GAL4P04386 881 aa3.48□□□□□ -1.85
SEC4YFL005W CDC31P06704 161 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W KRS1P15180 591 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W NPR2P39923 615 aa3.48□□□□□ -1.85
SEC4YFL005W XBP1P40489 647 aa3.48□□□□□ -1.85
SEC4YFL005W PSA1P41940 361 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W RPS7BP48164 190 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W MRX6P48564 524 aa3.48□□□□□ -1.85
SEC4YFL005W ARE2P53629 642 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W ASI1P54074 624 aa3.48□□□□□ -1.85
SEC4YFL005W BUD22Q04347 519 aaKnown RBP3.48□□□□□ -1.85
SEC4YFL005W TDA9Q04545 1251 aa3.48□□□□□ -1.85
SEC4YFL005W YEH1Q07804 573 aa3.48□□□□□ -1.85
SEC4YFL005W FRE3Q08905 711 aa3.48□□□□□ -1.85
SEC4YFL005W SPE4Q12455 300 aa3.48□□□□□ -1.85
SEC4YFL005W ARD1P07347 238 aaPredicted RBP3.47□□□□□ -1.85
SEC4YFL005W CLB2P24869 491 aa3.47□□□□□ -1.85
SEC4YFL005W YIH1P25637 258 aa3.47□□□□□ -1.85
SEC4YFL005W PEP3P27801 918 aa3.47□□□□□ -1.85
SEC4YFL005W JNM1P36224 373 aa3.47□□□□□ -1.85
SEC4YFL005W ELO1P39540 310 aa3.47□□□□□ -1.85
SEC4YFL005W NOC2P39744 710 aaKnown RBP3.47□□□□□ -1.85
SEC4YFL005W RGI2P40188 164 aa3.47□□□□□ -1.85
SEC4YFL005W YIL024CP40543 189 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms