RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.14	□□□□□ -1.75
SLX8	YER116C	YPT6	Q99260	215 aa		4.14	□□□□□ -1.75
SLX8	YER116C	VCX1	Q99385	411 aa		4.14	□□□□□ -1.75
SLX8	YER116C	STE2	D6VTK4	431 aa		4.13	□□□□□ -1.75
SLX8	YER116C	HMG2	P12684	1045 aa		4.13	□□□□□ -1.75
SLX8	YER116C	CHS2	P14180	963 aa		4.13	□□□□□ -1.75
SLX8	YER116C	SNF5	P18480	905 aa		4.13	□□□□□ -1.75
SLX8	YER116C	BOS1	P25385	244 aa		4.13	□□□□□ -1.75
SLX8	YER116C	SYN8	P31377	255 aa		4.13	□□□□□ -1.75
SLX8	YER116C	GCD7	P32502	381 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX8	YER116C	MTC7	P32633	139 aa		4.13	□□□□□ -1.75
SLX8	YER116C	AUR1	P36107	401 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX8	YER116C	GLG1	P36143	616 aa		4.13	□□□□□ -1.75
SLX8	YER116C	TDP1	P38319	544 aa		4.13	□□□□□ -1.75
SLX8	YER116C	SLX1	P38324	304 aa		4.13	□□□□□ -1.75
SLX8	YER116C	LIN1	P38852	340 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX8	YER116C	SLZ1	P40167	298 aa		4.13	□□□□□ -1.75
SLX8	YER116C	YIL108W	P40483	696 aa	Known RBP	4.13	□□□□□ -1.75
SLX8	YER116C	TED1	P40533	473 aa		4.13	□□□□□ -1.75
SLX8	YER116C	PXA1	P41909	870 aa		4.13	□□□□□ -1.75
SLX8	YER116C	DLD2	P46681	530 aa	Known RBP	4.13	□□□□□ -1.75
SLX8	YER116C	TAM41	P53230	385 aa		4.13	□□□□□ -1.75
SLX8	YER116C	TNA1	P53322	534 aa		4.13	□□□□□ -1.75
SLX8	YER116C	MPP6	P53725	186 aa	Predicted RBP	4.13	□□□□□ -1.75
SLX8	YER116C	TRS31	Q03337	283 aa		4.13	□□□□□ -1.75
SLX8	YER116C	ARR1	Q06596	294 aa		4.13	□□□□□ -1.75
SLX8	YER116C	UAF30	Q08747	228 aa		4.13	□□□□□ -1.75
SLX8	YER116C	BUG1	Q12191	341 aa		4.13	□□□□□ -1.75
SLX8	YER116C	LDB17	Q12342	491 aa		4.13	□□□□□ -1.75
SLX8	YER116C	CBP2	P03874	630 aa	Predicted RBP	4.12	□□□□□ -1.75
SLX8	YER116C	GAL80	P04387	435 aa		4.12	□□□□□ -1.75
SLX8	YER116C	ARG80	P07249	177 aa		4.12	□□□□□ -1.75
SLX8	YER116C	GCD2	P12754	651 aa	Predicted RBP	4.12	□□□□□ -1.75
SLX8	YER116C	FRS1	P15624	595 aa	Known RBP	4.12	□□□□□ -1.75
SLX8	YER116C	RPC82	P32349	654 aa		4.12	□□□□□ -1.75
SLX8	YER116C	NTH1	P32356	751 aa		4.12	□□□□□ -1.75
SLX8	YER116C	PET127	P32606	800 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YPT7	P32939	208 aa		4.12	□□□□□ -1.75
SLX8	YER116C	KES1	P35844	434 aa	Known RBP	4.12	□□□□□ -1.75
SLX8	YER116C	TPO5	P36029	618 aa		4.12	□□□□□ -1.75
SLX8	YER116C	SLM4	P38247	162 aa		4.12	□□□□□ -1.75
SLX8	YER116C	RFC3	P38629	340 aa		4.12	□□□□□ -1.75
SLX8	YER116C	STB5	P38699	743 aa		4.12	□□□□□ -1.75
SLX8	YER116C	AKR1	P39010	764 aa		4.12	□□□□□ -1.75
SLX8	YER116C	AFG3	P39925	761 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YTA12	P40341	825 aa		4.12	□□□□□ -1.75
SLX8	YER116C	PET130	P47065	347 aa		4.12	□□□□□ -1.75
SLX8	YER116C	MTR3	P48240	250 aa	Predicted RBP	4.12	□□□□□ -1.75
SLX8	YER116C	ASE1	P50275	885 aa		4.12	□□□□□ -1.75
SLX8	YER116C	RAI1	P53063	387 aa	Known RBP	4.12	□□□□□ -1.75
SLX8	YER116C	VID30	P53076	958 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YNL247W	P53852	767 aa	Known RBP	4.12	□□□□□ -1.75
SLX8	YER116C	MUB1	Q03162	620 aa		4.12	□□□□□ -1.75
SLX8	YER116C	CSI1	Q04368	295 aa		4.12	□□□□□ -1.75
SLX8	YER116C	ASM4	Q05166	528 aa		4.12	□□□□□ -1.75
SLX8	YER116C	RQC1	Q05468	723 aa	Known RBP	4.12	□□□□□ -1.75
SLX8	YER116C	VPS38	Q05919	439 aa		4.12	□□□□□ -1.75
SLX8	YER116C	ADY4	Q05955	493 aa		4.12	□□□□□ -1.75
SLX8	YER116C	XYL2	Q07993	356 aa		4.12	□□□□□ -1.75
SLX8	YER116C	SGO1	Q08490	590 aa		4.12	□□□□□ -1.75
SLX8	YER116C	GPR1	Q12361	961 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YLR278C	Q05854	1341 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YML133C	Q03099	1374 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YLL067C	Q07888	1374 aa		4.12	□□□□□ -1.75
SLX8	YER116C	YLL066C	Q99208	1374 aa		4.12	□□□□□ -1.75
SLX8	YER116C	VPS63	O13549	108 aa		4.11	□□□□□ -1.75
SLX8	YER116C	RPS9B	P05755	195 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	PYC1	P11154	1178 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	ERS1	P17261	260 aa		4.11	□□□□□ -1.75
SLX8	YER116C	EMC1	P25574	760 aa		4.11	□□□□□ -1.75
SLX8	YER116C	HSP104	P31539	908 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	AFG1	P32317	509 aa		4.11	□□□□□ -1.75
SLX8	YER116C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SLX8	YER116C	MGM101	P32787	269 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	YSC84	P32793	468 aa		4.11	□□□□□ -1.75
SLX8	YER116C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SLX8	YER116C	CMC1	P36064	111 aa		4.11	□□□□□ -1.75
SLX8	YER116C	CUE2	P36075	443 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	YKR073C	P36153	106 aa		4.11	□□□□□ -1.75
SLX8	YER116C	ECM21	P38167	1117 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	GDT1	P38301	280 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX8	YER116C	MSG5	P38590	489 aa		4.11	□□□□□ -1.75
SLX8	YER116C	TCD1	P38756	429 aa		4.11	□□□□□ -1.75
SLX8	YER116C	KEL1	P38853	1164 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	MNN9	P39107	395 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	YIL077C	P40508	320 aa		4.11	□□□□□ -1.75
SLX8	YER116C	ULP2	P40537	1034 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX8	YER116C	IAH1	P41734	238 aa		4.11	□□□□□ -1.75
SLX8	YER116C	ELP2	P42935	788 aa		4.11	□□□□□ -1.75
SLX8	YER116C	GCN20	P43535	752 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
SLX8	YER116C	CTR1	P49573	406 aa		4.11	□□□□□ -1.75
SLX8	YER116C	EFM5	P53200	248 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	SDH1	Q00711	640 aa		4.11	□□□□□ -1.75
SLX8	YER116C	YPL108W	Q02872	168 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX8	YER116C	VPS20	Q04272	221 aa		4.11	□□□□□ -1.75
SLX8	YER116C	RTN1	Q04947	295 aa	Known RBP	4.11	□□□□□ -1.75
SLX8	YER116C	YLR297W	Q05899	129 aa		4.11	□□□□□ -1.75
SLX8	YER116C	RCL1	Q08096	367 aa	Predicted RBP	4.11	□□□□□ -1.75
SLX8	YER116C	HMI1	Q12039	706 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 140.9 ms