RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YRF1-4O13559 1382 aa1.39□□□□□ -2.19
SWI4YER111C AAC1P04710 309 aa1.39□□□□□ -2.19
SWI4YER111C HXK2P04807 486 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C TPK2P06245 380 aa1.39□□□□□ -2.19
SWI4YER111C SES1P07284 462 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C PDX1P16451 410 aa1.39□□□□□ -2.19
SWI4YER111C SPE2P21182 396 aa1.39□□□□□ -2.19
SWI4YER111C AMD2P22580 549 aa1.39□□□□□ -2.19
SWI4YER111C MNE1P24720 663 aa1.39□□□□□ -2.19
SWI4YER111C GPI10P30777 616 aa1.39□□□□□ -2.19
SWI4YER111C ICS2P38284 255 aa1.39□□□□□ -2.19
SWI4YER111C SSN2P38931 1420 aa1.39□□□□□ -2.19
SWI4YER111C MRX1P40050 688 aa1.39□□□□□ -2.19
SWI4YER111C SGN1P40561 250 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SWI4YER111C NPA3P47122 385 aa1.39□□□□□ -2.19
SWI4YER111C AAD10P47182 288 aa1.39□□□□□ -2.19
SWI4YER111C DIA3P52290 468 aa1.39□□□□□ -2.19
SWI4YER111C VID30P53076 958 aa1.39□□□□□ -2.19
SWI4YER111C PIL1P53252 339 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C COQ6P53318 479 aa1.39□□□□□ -2.19
SWI4YER111C INN1P53901 409 aa1.39□□□□□ -2.19
SWI4YER111C YAT1P80235 687 aa1.39□□□□□ -2.19
SWI4YER111C AIM32Q04689 311 aa1.39□□□□□ -2.19
SWI4YER111C VPS38Q05919 439 aa1.39□□□□□ -2.19
SWI4YER111C ARO10Q06408 635 aa1.39□□□□□ -2.19
SWI4YER111C ATG23Q06671 453 aa1.39□□□□□ -2.19
SWI4YER111C RTC1Q08281 1341 aa1.39□□□□□ -2.19
SWI4YER111C CIR2Q08822 631 aa1.39□□□□□ -2.19
SWI4YER111C VCX1Q99385 411 aa1.39□□□□□ -2.19
SWI4YER111C ECM5Q03214 1411 aa1.39□□□□□ -2.19
SWI4YER111C SPT7P35177 1332 aa1.39□□□□□ -2.19
SWI4YER111C LCB1P25045 558 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C RRP43P25359 394 aaPredicted RBP1.39□□□□□ -2.19
SWI4YER111C DMC1P25453 334 aa1.39□□□□□ -2.19
SWI4YER111C LRE1P25579 583 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C YIH1P25637 258 aa1.39□□□□□ -2.19
SWI4YER111C CTS1P29029 562 aa1.39□□□□□ -2.19
SWI4YER111C PAP1P29468 568 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C SAS3P34218 831 aa1.39□□□□□ -2.19
SWI4YER111C KES1P35844 434 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C ADE17P38009 592 aaKnown RBP1.39□□□□□ -2.19
SWI4YER111C UBP5P39944 805 aa1.39□□□□□ -2.19
SWI4YER111C BUL1P48524 976 aa1.39□□□□□ -2.19
SWI4YER111C STB4P50104 949 aa1.39□□□□□ -2.19
SWI4YER111C RMT2Q03305 412 aa1.39□□□□□ -2.19
SWI4YER111C PLM2Q04383 521 aa1.39□□□□□ -2.19
SWI4YER111C YLR049CQ12110 428 aa1.39□□□□□ -2.19
SWI4YER111C ACF2Q12168 779 aa1.39□□□□□ -2.19
SWI4YER111C YJR112W-AQ3E743 109 aa1.39□□□□□ -2.19
SWI4YER111C STU1P38198 1513 aa1.38□□□□□ -2.19
SWI4YER111C BCK1Q01389 1478 aa1.38□□□□□ -2.19
SWI4YER111C SEC3P33332 1336 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C MF(ALPHA)1P01149 165 aa1.38□□□□□ -2.19
SWI4YER111C BI2P03873 423 aa1.38□□□□□ -2.19
SWI4YER111C CPA2P03965 1118 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C RPL19AP0CX82 189 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C RPL19BP0CX83 189 aaPredicted RBP1.38□□□□□ -2.19
SWI4YER111C RPL3P14126 387 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C PWP1P21304 576 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C CLB3P24870 427 aa1.38□□□□□ -2.19
SWI4YER111C TFB1P32776 642 aa1.38□□□□□ -2.19
SWI4YER111C DEF1P35732 738 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C STB6P36085 766 aa1.38□□□□□ -2.19
SWI4YER111C UBP13P38187 747 aa1.38□□□□□ -2.19
SWI4YER111C VBA2P38358 474 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C UTP9P38882 575 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C RGI2P40188 164 aa1.38□□□□□ -2.19
SWI4YER111C ALG5P40350 334 aa1.38□□□□□ -2.19
SWI4YER111C YJL068CP40363 299 aa1.38□□□□□ -2.19
SWI4YER111C ASG1P40467 964 aa1.38□□□□□ -2.19
SWI4YER111C YJL055WP47044 245 aa1.38□□□□□ -2.19
SWI4YER111C ASN1P49089 572 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C LYS4P49367 693 aaPredicted RBP1.38□□□□□ -2.19
SWI4YER111C YGR066CP53242 292 aa1.38□□□□□ -2.19
SWI4YER111C SUN4P53616 420 aa1.38□□□□□ -2.19
SWI4YER111C SNF12P53628 566 aa1.38□□□□□ -2.19
SWI4YER111C CPR8P53728 308 aa1.38□□□□□ -2.19
SWI4YER111C KIN4Q01919 800 aa1.38□□□□□ -2.19
SWI4YER111C PFA5Q03289 374 aa1.38□□□□□ -2.19
SWI4YER111C RCF1Q03713 159 aa1.38□□□□□ -2.19
SWI4YER111C DPB4Q04603 196 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C GTB1Q04924 702 aa1.38□□□□□ -2.19
SWI4YER111C YDL242WQ07746 117 aa1.38□□□□□ -2.19
SWI4YER111C YEH1Q07804 573 aa1.38□□□□□ -2.19
SWI4YER111C BUD7Q08754 746 aa1.38□□□□□ -2.19
SWI4YER111C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
SWI4YER111C BMS1Q08965 1183 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C NUP188P52593 1655 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C PDR10P51533 1564 aa1.38□□□□□ -2.19
SWI4YER111C NUP170P38181 1502 aa1.38□□□□□ -2.19
SWI4YER111C PAN1P32521 1480 aa1.38□□□□□ -2.19
SWI4YER111C SCC2Q04002 1493 aa1.38□□□□□ -2.19
SWI4YER111C ARD1P07347 238 aaPredicted RBP1.38□□□□□ -2.19
SWI4YER111C ROX1P25042 368 aa1.38□□□□□ -2.19
SWI4YER111C RPC53P25441 422 aa1.38□□□□□ -2.19
SWI4YER111C TRM2P33753 639 aa1.38□□□□□ -2.19
SWI4YER111C SEF1P34228 1148 aa1.38□□□□□ -2.19
SWI4YER111C ERC1P38767 581 aa1.38□□□□□ -2.19
SWI4YER111C GDI1P39958 451 aaKnown RBP1.38□□□□□ -2.19
SWI4YER111C BUD16P39988 312 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms