RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C TPK2P06245 380 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-LR1P0C2J4 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-FP0CX61 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-GR2P0CX62 438 aa1.35□□□□□ -2.19
SEC3YER008C SIR1P21691 654 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-CP25383 438 aa1.35□□□□□ -2.19
SEC3YER008C PRE4P30657 266 aa1.35□□□□□ -2.19
SEC3YER008C SIF2P38262 535 aa1.35□□□□□ -2.19
SEC3YER008C SRP68P38687 599 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C YAP3P38749 330 aa1.35□□□□□ -2.19
SEC3YER008C YJL193WP39542 402 aa1.35□□□□□ -2.19
SEC3YER008C GET2P40056 285 aa1.35□□□□□ -2.19
SEC3YER008C CAB2P40506 365 aa1.35□□□□□ -2.19
SEC3YER008C SIP4P46954 829 aa1.35□□□□□ -2.19
SEC3YER008C YGL036WP53185 909 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C BSC5P53755 489 aa1.35□□□□□ -2.19
SEC3YER008C YPL108WQ02872 168 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C TY2A-DR2Q03483 438 aa1.35□□□□□ -2.19
SEC3YER008C VPS64Q03944 604 aa1.35□□□□□ -2.19
SEC3YER008C SPC19Q03954 165 aa1.35□□□□□ -2.19
SEC3YER008C GFD1Q04839 188 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C YFT2Q06676 274 aa1.35□□□□□ -2.19
SEC3YER008C YPL191CQ08930 360 aa1.35□□□□□ -2.19
SEC3YER008C TGS1Q12052 315 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-BQ12260 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-OR2Q12293 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-DR1Q12392 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-OR1Q12439 438 aa1.35□□□□□ -2.19
SEC3YER008C TY2A-DR3Q99303 438 aa1.35□□□□□ -2.19
SEC3YER008C GSC2P40989 1895 aa1.35□□□□□ -2.19
SEC3YER008C YLR302CO13544 120 aa1.35□□□□□ -2.19
SEC3YER008C CDC6P09119 513 aa1.35□□□□□ -2.19
SEC3YER008C CBS1P14066 229 aa1.35□□□□□ -2.19
SEC3YER008C DAP2P18962 818 aa1.35□□□□□ -2.19
SEC3YER008C ACO1P19414 778 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
SEC3YER008C ADK2P26364 225 aa1.35□□□□□ -2.19
SEC3YER008C RME1P32338 300 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C TFB1P32776 642 aa1.35□□□□□ -2.19
SEC3YER008C TEF4P36008 412 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C ALY1P36117 915 aa1.35□□□□□ -2.19
SEC3YER008C GMH1P36125 273 aa1.35□□□□□ -2.19
SEC3YER008C LYS9P38999 446 aa1.35□□□□□ -2.19
SEC3YER008C FTR1P40088 404 aa1.35□□□□□ -2.19
SEC3YER008C KHA1P40309 873 aa1.35□□□□□ -2.19
SEC3YER008C RAD26P40352 1085 aa1.35□□□□□ -2.19
SEC3YER008C UBC11P52492 156 aa1.35□□□□□ -2.19
SEC3YER008C DAK1P54838 584 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C UFO1Q04511 668 aa1.35□□□□□ -2.19
SEC3YER008C MRH1Q12117 320 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C RPL19AP0CX82 189 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C RPL19BP0CX83 189 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C PRP28P23394 588 aa1.35□□□□□ -2.19
SEC3YER008C PRP45P28004 379 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C DSS4P32601 143 aa1.35□□□□□ -2.19
SEC3YER008C RPT3P33298 428 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C MDL1P33310 695 aa1.35□□□□□ -2.19
SEC3YER008C YKL050CP35736 922 aa1.35□□□□□ -2.19
SEC3YER008C ADH5P38113 351 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C MAL33P38157 468 aa1.35□□□□□ -2.19
SEC3YER008C FMP52P40008 231 aa1.35□□□□□ -2.19
SEC3YER008C VRG4P40107 337 aa1.35□□□□□ -2.19
SEC3YER008C JEM1P40358 645 aa1.35□□□□□ -2.19
SEC3YER008C PRM2P40534 656 aa1.35□□□□□ -2.19
SEC3YER008C HOS2P53096 452 aaPredicted RBP1.35□□□□□ -2.19
SEC3YER008C RSF1Q05043 376 aa1.35□□□□□ -2.19
SEC3YER008C PHO92Q06390 306 aa1.35□□□□□ -2.19
SEC3YER008C PUS9Q12069 462 aa1.35□□□□□ -2.19
SEC3YER008C PDH1Q12428 516 aaKnown RBP1.35□□□□□ -2.19
SEC3YER008C YBR126W-AQ8TGU7 68 aa1.35□□□□□ -2.19
SEC3YER008C SEM1O94742 89 aa1.34□□□□□ -2.19
SEC3YER008C HEM1P09950 548 aaPredicted RBP1.34□□□□□ -2.19
SEC3YER008C VPS33P20795 691 aa1.34□□□□□ -2.19
SEC3YER008C SMI1P32566 505 aa1.34□□□□□ -2.19
SEC3YER008C VPS41P38959 992 aa1.34□□□□□ -2.19
SEC3YER008C PFK26P40433 827 aaKnown RBP1.34□□□□□ -2.19
SEC3YER008C UBP7P40453 1071 aa1.34□□□□□ -2.19
SEC3YER008C SAP4P53036 818 aa1.34□□□□□ -2.19
SEC3YER008C YIP4P53093 235 aa1.34□□□□□ -2.19
SEC3YER008C SLU7Q02775 382 aaKnown RBP1.34□□□□□ -2.19
SEC3YER008C RMT2Q03305 412 aa1.34□□□□□ -2.19
SEC3YER008C RCF1Q03713 159 aa1.34□□□□□ -2.19
SEC3YER008C CRT10Q08226 957 aa1.34□□□□□ -2.19
SEC3YER008C CTI6Q08923 506 aa1.34□□□□□ -2.19
SEC3YER008C SCM3Q12334 223 aa1.34□□□□□ -2.19
SEC3YER008C AHA1Q12449 350 aaKnown RBP1.34□□□□□ -2.19
SEC3YER008C PMD1P32634 1753 aa1.34□□□□□ -2.19
SEC3YER008C VPS13Q07878 3144 aa1.34□□□□□ -2.19
SEC3YER008C CET1O13297 549 aaPredicted RBP1.34□□□□□ -2.19
SEC3YER008C RPC40P07703 335 aaKnown RBP1.34□□□□□ -2.19
SEC3YER008C STE50P25344 346 aa1.34□□□□□ -2.19
SEC3YER008C YLF2P38746 405 aa1.34□□□□□ -2.19
SEC3YER008C YIL166CP40445 542 aa1.34□□□□□ -2.19
SEC3YER008C BIT61P47041 543 aa1.34□□□□□ -2.19
SEC3YER008C TCB2P48231 1178 aa1.34□□□□□ -2.19
SEC3YER008C INN1P53901 409 aa1.34□□□□□ -2.19
SEC3YER008C BUD7Q08754 746 aa1.34□□□□□ -2.19
SEC3YER008C MLH3Q12083 715 aa1.34□□□□□ -2.19
SEC3YER008C RKI1Q12189 258 aa1.34□□□□□ -2.19
SEC3YER008C PSY3Q12318 242 aa1.34□□□□□ -2.19
SEC3YER008C SKM1Q12469 655 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms