RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	NIT1	P40447	199 aa		4.17	□□□□□ -1.74
NUG1	YER006W	SHQ1	P40486	507 aa	Predicted RBP	4.17	□□□□□ -1.74
NUG1	YER006W	AXL1	P40851	1208 aa		4.17	□□□□□ -1.74
NUG1	YER006W	YDL183C	P48569	320 aa		4.17	□□□□□ -1.74
NUG1	YER006W	RAI1	P53063	387 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	CDC55	Q00362	526 aa		4.17	□□□□□ -1.74
NUG1	YER006W	PET117	Q02771	107 aa		4.17	□□□□□ -1.74
NUG1	YER006W	BUD22	Q04347	519 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	YMR027W	Q04371	470 aa		4.17	□□□□□ -1.74
NUG1	YER006W	VTA1	Q06263	330 aa		4.17	□□□□□ -1.74
NUG1	YER006W	ARO10	Q06408	635 aa		4.17	□□□□□ -1.74
NUG1	YER006W	DIS3	Q08162	1001 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	TMA16	Q08687	178 aa		4.17	□□□□□ -1.74
NUG1	YER006W	RPN8	Q08723	338 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	TAF10	Q12030	206 aa		4.17	□□□□□ -1.74
NUG1	YER006W	NUR1	Q12066	484 aa		4.17	□□□□□ -1.74
NUG1	YER006W	MNL2	Q12205	849 aa		4.17	□□□□□ -1.74
NUG1	YER006W	FAB1	P34756	2278 aa		4.16	□□□□□ -1.74
NUG1	YER006W	FLP1	P03870	423 aa		4.16	□□□□□ -1.74
NUG1	YER006W	MET6	P05694	767 aa	Known RBP	4.16	□□□□□ -1.74
NUG1	YER006W	LPD1	P09624	499 aa	Known RBP	4.16	□□□□□ -1.74
NUG1	YER006W	VMA16	P23968	213 aa		4.16	□□□□□ -1.74
NUG1	YER006W	DBF20	P32328	564 aa		4.16	□□□□□ -1.74
NUG1	YER006W	PCH2	P38126	564 aa		4.16	□□□□□ -1.74
NUG1	YER006W	TMA108	P40462	946 aa		4.16	□□□□□ -1.74
NUG1	YER006W	HPM1	P40481	377 aa		4.16	□□□□□ -1.74
NUG1	YER006W	CAB2	P40506	365 aa		4.16	□□□□□ -1.74
NUG1	YER006W	YRB2	P40517	327 aa		4.16	□□□□□ -1.74
NUG1	YER006W	OYE3	P41816	400 aa	Predicted RBP	4.16	□□□□□ -1.74
NUG1	YER006W	FMP32	P43557	207 aa		4.16	□□□□□ -1.74
NUG1	YER006W	MDE1	P47095	244 aa		4.16	□□□□□ -1.74
NUG1	YER006W	MLC1	P53141	149 aa		4.16	□□□□□ -1.74
NUG1	YER006W	URC2	Q04411	772 aa		4.16	□□□□□ -1.74
NUG1	YER006W	UFO1	Q04511	668 aa		4.16	□□□□□ -1.74
NUG1	YER006W	PHO92	Q06390	306 aa		4.16	□□□□□ -1.74
NUG1	YER006W	VAC14	Q06708	880 aa		4.16	□□□□□ -1.74
NUG1	YER006W	NTG2	Q08214	380 aa		4.16	□□□□□ -1.74
NUG1	YER006W	MUM3	Q08750	479 aa		4.16	□□□□□ -1.74
NUG1	YER006W	ALG6	Q12001	544 aa	Known RBP	4.16	□□□□□ -1.74
NUG1	YER006W	GET4	Q12125	312 aa		4.16	□□□□□ -1.74
NUG1	YER006W	SET6	Q12529	373 aa		4.16	□□□□□ -1.74
NUG1	YER006W	UTP10	P42945	1769 aa	Known RBP	4.16	□□□□□ -1.74
NUG1	YER006W	RPL19A	P0CX82	189 aa	Known RBP	4.15	□□□□□ -1.74
NUG1	YER006W	RPL19B	P0CX83	189 aa	Predicted RBP	4.15	□□□□□ -1.74
NUG1	YER006W	PHO8	P11491	566 aa		4.15	□□□□□ -1.74
NUG1	YER006W	WHI2	P12611	486 aa		4.15	□□□□□ -1.74
NUG1	YER006W	NPP1	P25353	742 aa		4.15	□□□□□ -1.74
NUG1	YER006W	DMC1	P25453	334 aa		4.15	□□□□□ -1.74
NUG1	YER006W	GCD7	P32502	381 aa	Predicted RBP	4.15	□□□□□ -1.74
NUG1	YER006W	ANR2	P36090	516 aa	Predicted RBP	4.15	□□□□□ -1.74
NUG1	YER006W	AAP1	P37898	856 aa	Known RBP	4.15	□□□□□ -1.74
NUG1	YER006W	CDS1	P38221	457 aa		4.15	□□□□□ -1.74
NUG1	YER006W	COS111	P38308	924 aa		4.15	□□□□□ -1.74
NUG1	YER006W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
NUG1	YER006W	TRM5	P38793	499 aa		4.15	□□□□□ -1.74
NUG1	YER006W	YHR219W	P38900	624 aa		4.15	□□□□□ -1.74
NUG1	YER006W	VMA7	P39111	118 aa		4.15	□□□□□ -1.74
NUG1	YER006W	YER184C	P39961	794 aa		4.15	□□□□□ -1.74
NUG1	YER006W	IES5	P40060	125 aa		4.15	□□□□□ -1.74
NUG1	YER006W	AVT6	P40074	448 aa		4.15	□□□□□ -1.74
NUG1	YER006W	PRP24	P49960	444 aa	Known RBP	4.15	□□□□□ -1.74
NUG1	YER006W	TAF6	P53040	516 aa		4.15	□□□□□ -1.74
NUG1	YER006W	MND1	P53102	219 aa		4.15	□□□□□ -1.74
NUG1	YER006W	NUT1	P53114	1132 aa		4.15	□□□□□ -1.74
NUG1	YER006W	MET13	P53128	600 aa		4.15	□□□□□ -1.74
NUG1	YER006W	PEX8	P53248	589 aa		4.15	□□□□□ -1.74
NUG1	YER006W	VPS75	P53853	264 aa		4.15	□□□□□ -1.74
NUG1	YER006W	ACS1	Q01574	713 aa		4.15	□□□□□ -1.74
NUG1	YER006W	DPB4	Q04603	196 aa	Known RBP	4.15	□□□□□ -1.74
NUG1	YER006W	NKP2	Q06162	153 aa		4.15	□□□□□ -1.74
NUG1	YER006W	GRS2	Q06817	618 aa		4.15	□□□□□ -1.74
NUG1	YER006W	RCL1	Q08096	367 aa	Predicted RBP	4.15	□□□□□ -1.74
NUG1	YER006W	SGT1	Q08446	395 aa		4.15	□□□□□ -1.74
NUG1	YER006W	FMP40	Q08968	688 aa	Predicted RBP	4.15	□□□□□ -1.74
NUG1	YER006W	APL4	Q12028	832 aa		4.15	□□□□□ -1.74
NUG1	YER006W	OSW2	Q12202	724 aa		4.15	□□□□□ -1.74
NUG1	YER006W	PMA1	P05030	918 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	RPL8A	P17076	256 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	PRP28	P23394	588 aa		4.14	□□□□□ -1.75
NUG1	YER006W	ADP1	P25371	1049 aa		4.14	□□□□□ -1.75
NUG1	YER006W	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	PMT2	P31382	759 aa		4.14	□□□□□ -1.75
NUG1	YER006W	CDC12	P32468	407 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	LYP1	P32487	611 aa		4.14	□□□□□ -1.75
NUG1	YER006W	SSE2	P32590	693 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	YKR078W	P36158	585 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	IMD2	P38697	523 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	NPT1	P39683	429 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	AST2	P39945	430 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	BUD16	P39988	312 aa		4.14	□□□□□ -1.75
NUG1	YER006W	ASG1	P40467	964 aa		4.14	□□□□□ -1.75
NUG1	YER006W	MND2	P40577	368 aa		4.14	□□□□□ -1.75
NUG1	YER006W	QRI1	P43123	477 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	LOH1	P47055	219 aa		4.14	□□□□□ -1.75
NUG1	YER006W	YML6	P51998	286 aa		4.14	□□□□□ -1.75
NUG1	YER006W	PBP1	P53297	722 aa	Known RBP	4.14	□□□□□ -1.75
NUG1	YER006W	MNT4	P53745	580 aa		4.14	□□□□□ -1.75
NUG1	YER006W	YNR068C	P53754	272 aa		4.14	□□□□□ -1.75
NUG1	YER006W	VAC7	P53950	1165 aa		4.14	□□□□□ -1.75
NUG1	YER006W	HDA1	P53973	706 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms