RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W UBX3Q12229 455 aa3.29□□□□□ -1.88
VMA8YEL051W GLE1Q12315 538 aa3.29□□□□□ -1.88
VMA8YEL051W ENT1Q12518 454 aa3.29□□□□□ -1.88
VMA8YEL051W PCD1Q12524 340 aa3.29□□□□□ -1.88
VMA8YEL051W ATP2P00830 511 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W THR4P16120 514 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W RER1P25560 188 aa3.28□□□□□ -1.88
VMA8YEL051W CDC60P26637 1090 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W LAC1P28496 418 aa3.28□□□□□ -1.88
VMA8YEL051W EFB1P32471 206 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W CNS1P33313 385 aa3.28□□□□□ -1.88
VMA8YEL051W NUP120P35729 1037 aa3.28□□□□□ -1.88
VMA8YEL051W HES1P35843 434 aa3.28□□□□□ -1.88
VMA8YEL051W TEF4P36008 412 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W RRN3P36070 627 aa3.28□□□□□ -1.88
VMA8YEL051W ESL2P36168 1195 aa3.28□□□□□ -1.88
VMA8YEL051W KAP123P40069 1113 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W BNA1P47096 177 aa3.28□□□□□ -1.88
VMA8YEL051W YPT11P48559 417 aa3.28□□□□□ -1.88
VMA8YEL051W YPR003CP53394 754 aa3.28□□□□□ -1.88
VMA8YEL051W YNL050CP53952 270 aa3.28□□□□□ -1.88
VMA8YEL051W VID22Q05934 901 aa3.28□□□□□ -1.88
VMA8YEL051W ARV1Q06541 321 aa3.28□□□□□ -1.88
VMA8YEL051W THI3Q07471 609 aa3.28□□□□□ -1.88
VMA8YEL051W RVB2Q12464 471 aaKnown RBP3.28□□□□□ -1.88
VMA8YEL051W BIK1P11709 440 aa3.27□□□□□ -1.89
VMA8YEL051W HNM1P19807 563 aa3.27□□□□□ -1.89
VMA8YEL051W GFD2P25370 566 aaKnown RBP3.27□□□□□ -1.89
VMA8YEL051W URK1P27515 501 aa3.27□□□□□ -1.89
VMA8YEL051W MCM10P32354 571 aa3.27□□□□□ -1.89
VMA8YEL051W SMY1P32364 656 aaKnown RBP3.27□□□□□ -1.89
VMA8YEL051W IME2P32581 645 aa3.27□□□□□ -1.89
VMA8YEL051W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VMA8YEL051W OPY1P38271 328 aa3.27□□□□□ -1.89
VMA8YEL051W APE4P38821 490 aa3.27□□□□□ -1.89
VMA8YEL051W AXL2P38928 823 aa3.27□□□□□ -1.89
VMA8YEL051W POP2P39008 433 aa3.27□□□□□ -1.89
VMA8YEL051W CDC1P40986 491 aa3.27□□□□□ -1.89
VMA8YEL051W BUD27P43573 796 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VMA8YEL051W CTF18P49956 741 aa3.27□□□□□ -1.89
VMA8YEL051W COG1P53079 417 aa3.27□□□□□ -1.89
VMA8YEL051W RRT6P53117 311 aaPredicted RBP3.27□□□□□ -1.89
VMA8YEL051W MTG1Q03151 367 aaPredicted RBP3.27□□□□□ -1.89
VMA8YEL051W PDR8Q06149 701 aa3.27□□□□□ -1.89
VMA8YEL051W NEW1Q08972 1196 aaKnown RBP3.27□□□□□ -1.89
VMA8YEL051W GUK1P15454 187 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W SRP54P20424 541 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W KRR1P25586 316 aaPredicted RBP3.26□□□□□ -1.89
VMA8YEL051W COY1P34237 679 aa3.26□□□□□ -1.89
VMA8YEL051W GCS1P35197 352 aa3.26□□□□□ -1.89
VMA8YEL051W TPA1P40032 644 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W YIL152WP40455 235 aa3.26□□□□□ -1.89
VMA8YEL051W UBX6P47049 396 aa3.26□□□□□ -1.89
VMA8YEL051W YGR016WP53209 190 aa3.26□□□□□ -1.89
VMA8YEL051W RSC1P53236 928 aa3.26□□□□□ -1.89
VMA8YEL051W YGR079WP53249 370 aa3.26□□□□□ -1.89
VMA8YEL051W JJJ1P53863 590 aa3.26□□□□□ -1.89
VMA8YEL051W CBK1P53894 756 aa3.26□□□□□ -1.89
VMA8YEL051W YNL144CP53907 740 aa3.26□□□□□ -1.89
VMA8YEL051W REX2P54964 269 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W CWC21Q03375 135 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W SPC19Q03954 165 aa3.26□□□□□ -1.89
VMA8YEL051W SWA2Q06677 668 aa3.26□□□□□ -1.89
VMA8YEL051W VIP1Q06685 1146 aaKnown RBP3.26□□□□□ -1.89
VMA8YEL051W YLR302CO13544 120 aa3.25□□□□□ -1.89
VMA8YEL051W YCR043CP25361 127 aa3.25□□□□□ -1.89
VMA8YEL051W PGS1P25578 521 aa3.25□□□□□ -1.89
VMA8YEL051W BUD14P27637 709 aa3.25□□□□□ -1.89
VMA8YEL051W PXA2P34230 853 aa3.25□□□□□ -1.89
VMA8YEL051W OCT1P35999 772 aa3.25□□□□□ -1.89
VMA8YEL051W EFM2P38347 419 aa3.25□□□□□ -1.89
VMA8YEL051W BFR1P38934 470 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
VMA8YEL051W CAJ1P39101 391 aa3.25□□□□□ -1.89
VMA8YEL051W YER034WP40022 185 aaKnown RBP3.25□□□□□ -1.89
VMA8YEL051W RIC1P40395 1056 aa3.25□□□□□ -1.89
VMA8YEL051W YIL161WP40449 235 aaKnown RBP3.25□□□□□ -1.89
VMA8YEL051W IST3P40565 148 aaPredicted RBP3.25□□□□□ -1.89
VMA8YEL051W PSP1P50896 841 aaKnown RBP3.25□□□□□ -1.89
VMA8YEL051W MEP3P53390 489 aa3.25□□□□□ -1.89
VMA8YEL051W SNZ1Q03148 297 aa3.25□□□□□ -1.89
VMA8YEL051W YDR109CQ04585 715 aa3.25□□□□□ -1.89
VMA8YEL051W RNH1Q04740 348 aa3.25□□□□□ -1.89
VMA8YEL051W SNO4Q04902 237 aa3.25□□□□□ -1.89
VMA8YEL051W ATG38Q05789 226 aaKnown RBP3.25□□□□□ -1.89
VMA8YEL051W ATG26Q06321 1198 aa3.25□□□□□ -1.89
VMA8YEL051W ARR1Q06596 294 aa3.25□□□□□ -1.89
VMA8YEL051W GSH2Q08220 491 aa3.25□□□□□ -1.89
VMA8YEL051W TMA16Q08687 178 aa3.25□□□□□ -1.89
VMA8YEL051W DSE3Q08729 430 aa3.25□□□□□ -1.89
VMA8YEL051W HSP33Q08914 237 aaKnown RBP3.25□□□□□ -1.89
VMA8YEL051W HSP32Q08992 237 aa3.25□□□□□ -1.89
VMA8YEL051W STF1P01098 86 aa3.24□□□□□ -1.89
VMA8YEL051W TY2A-LR1P0C2J4 438 aa3.24□□□□□ -1.89
VMA8YEL051W TY2A-FP0CX61 438 aa3.24□□□□□ -1.89
VMA8YEL051W TY2A-GR2P0CX62 438 aa3.24□□□□□ -1.89
VMA8YEL051W MRPL25P23369 157 aa3.24□□□□□ -1.89
VMA8YEL051W TY2A-CP25383 438 aa3.24□□□□□ -1.89
VMA8YEL051W RFA2P26754 273 aaKnown RBP3.24□□□□□ -1.89
VMA8YEL051W CHS3P29465 1165 aa3.24□□□□□ -1.89
VMA8YEL051W HIR2P32480 875 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms