RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C SRB5P32585 307 aa2.22□□□□□ -2.05
PCF11YDR228C NUP120P35729 1037 aa2.22□□□□□ -2.05
PCF11YDR228C SPC34P36131 295 aa2.22□□□□□ -2.05
PCF11YDR228C RFC1P38630 861 aaKnown RBP2.22□□□□□ -2.05
PCF11YDR228C ROK1P45818 564 aaPredicted RBP2.22□□□□□ -2.05
PCF11YDR228C TFC6Q06339 672 aa2.22□□□□□ -2.05
PCF11YDR228C YOL057WQ08225 711 aa2.22□□□□□ -2.05
PCF11YDR228C MIA40P36046 403 aa2.21□□□□□ -2.06
PCF11YDR228C YER130CP39959 443 aa2.21□□□□□ -2.06
PCF11YDR228C VPS27P40343 622 aaKnown RBP2.21□□□□□ -2.06
PCF11YDR228C ASE1P50275 885 aa2.21□□□□□ -2.06
PCF11YDR228C CIA1Q05583 330 aa2.21□□□□□ -2.06
PCF11YDR228C HCR1Q05775 265 aaKnown RBP2.21□□□□□ -2.06
PCF11YDR228C TY2A-LR1P0C2J4 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-FP0CX61 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-GR2P0CX62 438 aa2.2□□□□□ -2.06
PCF11YDR228C NOP1P15646 327 aaKnown RBP2.2□□□□□ -2.06
PCF11YDR228C RPB8P20436 146 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-CP25383 438 aa2.2□□□□□ -2.06
PCF11YDR228C YCL049CP25577 312 aa2.2□□□□□ -2.06
PCF11YDR228C TRS65P32893 560 aa2.2□□□□□ -2.06
PCF11YDR228C YJR061WP40355 935 aa2.2□□□□□ -2.06
PCF11YDR228C DIM1P41819 318 aaKnown RBP2.2□□□□□ -2.06
PCF11YDR228C YFR020WP43600 232 aa2.2□□□□□ -2.06
PCF11YDR228C CTF18P49956 741 aa2.2□□□□□ -2.06
PCF11YDR228C TAN1P53072 289 aaPredicted RBP2.2□□□□□ -2.06
PCF11YDR228C PKP2P53170 491 aa2.2□□□□□ -2.06
PCF11YDR228C YNR061CP53747 219 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-DR2Q03483 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-BQ12260 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-OR2Q12293 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-DR1Q12392 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-OR1Q12439 438 aa2.2□□□□□ -2.06
PCF11YDR228C TY2A-DR3Q99303 438 aa2.2□□□□□ -2.06
PCF11YDR228C PDA1P16387 420 aaKnown RBP2.2□□□□□ -2.06
PCF11YDR228C CPR3P25719 182 aa2.2□□□□□ -2.06
PCF11YDR228C ERG7P38604 731 aa2.2□□□□□ -2.06
PCF11YDR228C YHR218WP38899 603 aa2.2□□□□□ -2.06
PCF11YDR228C RTS1P38903 757 aa2.2□□□□□ -2.06
PCF11YDR228C YIL060WP40519 144 aa2.2□□□□□ -2.06
PCF11YDR228C ARC35P53731 342 aaKnown RBP2.2□□□□□ -2.06
PCF11YDR228C YDL218WQ07629 317 aa2.2□□□□□ -2.06
PCF11YDR228C TMA16Q08687 178 aa2.2□□□□□ -2.06
PCF11YDR228C RSA1Q08932 381 aa2.2□□□□□ -2.06
PCF11YDR228C ATG9Q12142 997 aa2.2□□□□□ -2.06
PCF11YDR228C CSR2Q12734 1121 aa2.2□□□□□ -2.06
PCF11YDR228C MTF2P10849 440 aa2.19□□□□□ -2.06
PCF11YDR228C TFC3P34111 1160 aa2.19□□□□□ -2.06
PCF11YDR228C PKP1P40530 394 aa2.19□□□□□ -2.06
PCF11YDR228C FAF1P40546 346 aaPredicted RBP2.19□□□□□ -2.06
PCF11YDR228C PAP2P53632 584 aaKnown RBP2.19□□□□□ -2.06
PCF11YDR228C IST1P53843 298 aaPredicted RBP2.19□□□□□ -2.06
PCF11YDR228C RPM2Q02773 1202 aa2.19□□□□□ -2.06
PCF11YDR228C TMA64Q04600 565 aaKnown RBP2.19□□□□□ -2.06
PCF11YDR228C PPT2Q12036 173 aa2.19□□□□□ -2.06
PCF11YDR228C COX17Q12287 69 aa2.19□□□□□ -2.06
PCF11YDR228C PCD1Q12524 340 aa2.19□□□□□ -2.06
PCF11YDR228C VCX1Q99385 411 aa2.19□□□□□ -2.06
PCF11YDR228C ERG1P32476 496 aaKnown RBP2.18□□□□□ -2.06
PCF11YDR228C MIC60P36112 540 aa2.18□□□□□ -2.06
PCF11YDR228C STV1P37296 890 aa2.18□□□□□ -2.06
PCF11YDR228C ACA1P39970 489 aa2.18□□□□□ -2.06
PCF11YDR228C AZF1P41696 914 aa2.18□□□□□ -2.06
PCF11YDR228C COG1P53079 417 aa2.18□□□□□ -2.06
PCF11YDR228C BOR1P53838 576 aa2.18□□□□□ -2.06
PCF11YDR228C YDR415CQ04033 374 aaPredicted RBP2.18□□□□□ -2.06
PCF11YDR228C SMA2Q04658 369 aa2.18□□□□□ -2.06
PCF11YDR228C ADE13Q05911 482 aaKnown RBP2.18□□□□□ -2.06
PCF11YDR228C ATG26Q06321 1198 aa2.18□□□□□ -2.06
PCF11YDR228C PSR2Q07949 397 aa2.18□□□□□ -2.06
PCF11YDR228C YOL159CQ08300 171 aa2.18□□□□□ -2.06
PCF11YDR228C BUD14P27637 709 aa2.18□□□□□ -2.06
PCF11YDR228C PRO3P32263 286 aaKnown RBP2.18□□□□□ -2.06
PCF11YDR228C TOM20P35180 183 aa2.18□□□□□ -2.06
PCF11YDR228C ESL2P36168 1195 aa2.18□□□□□ -2.06
PCF11YDR228C SMC3P47037 1230 aa2.18□□□□□ -2.06
PCF11YDR228C ZDS2P54786 942 aa2.18□□□□□ -2.06
PCF11YDR228C UBC1P21734 215 aaKnown RBP2.17□□□□□ -2.06
PCF11YDR228C MSM1P22438 575 aa2.17□□□□□ -2.06
PCF11YDR228C AVT5P38176 459 aa2.17□□□□□ -2.06
PCF11YDR228C UBA4P38820 440 aa2.17□□□□□ -2.06
PCF11YDR228C MDM31P38880 579 aa2.17□□□□□ -2.06
PCF11YDR228C FCP1Q03254 732 aa2.17□□□□□ -2.06
PCF11YDR228C PGS1P25578 521 aa2.16□□□□□ -2.06
PCF11YDR228C PHD1P36093 366 aa2.16□□□□□ -2.06
PCF11YDR228C MRPL36P36531 177 aa2.16□□□□□ -2.06
PCF11YDR228C AGP2P38090 596 aa2.16□□□□□ -2.06
PCF11YDR228C YDL186WP48568 277 aa2.16□□□□□ -2.06
PCF11YDR228C COS10P52924 374 aa2.16□□□□□ -2.06
PCF11YDR228C SOL4P53315 255 aa2.16□□□□□ -2.06
PCF11YDR228C YEH2Q07950 538 aa2.16□□□□□ -2.06
PCF11YDR228C CBS2P14905 389 aa2.16□□□□□ -2.06
PCF11YDR228C SNU114P36048 1008 aaKnown RBP2.16□□□□□ -2.06
PCF11YDR228C IFA38P38286 347 aa2.16□□□□□ -2.06
PCF11YDR228C PSF2P40359 213 aa2.16□□□□□ -2.06
PCF11YDR228C YJL068CP40363 299 aa2.16□□□□□ -2.06
PCF11YDR228C IST3P40565 148 aaPredicted RBP2.16□□□□□ -2.06
PCF11YDR228C DPB11P47027 764 aaPredicted RBP2.16□□□□□ -2.06
PCF11YDR228C ARP6Q12509 438 aa2.16□□□□□ -2.06
PCF11YDR228C HXK2P04807 486 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms