RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C YJR061WP40355 935 aa3.83□□□□□ -1.8
RUB1YDR139C YFR020WP43600 232 aa3.83□□□□□ -1.8
RUB1YDR139C ECI1Q05871 280 aa3.83□□□□□ -1.8
RUB1YDR139C SKG3Q06315 1026 aa3.83□□□□□ -1.8
RUB1YDR139C MCP2Q06567 569 aa3.83□□□□□ -1.8
RUB1YDR139C DSE3Q08729 430 aa3.83□□□□□ -1.8
RUB1YDR139C CIR2Q08822 631 aa3.83□□□□□ -1.8
RUB1YDR139C YLR112WQ12130 139 aa3.83□□□□□ -1.8
RUB1YDR139C FUM1P08417 488 aaKnown RBP3.82□□□□□ -1.8
RUB1YDR139C CLB2P24869 491 aa3.82□□□□□ -1.8
RUB1YDR139C PCL6P40038 420 aa3.82□□□□□ -1.8
RUB1YDR139C VRG4P40107 337 aa3.82□□□□□ -1.8
RUB1YDR139C DPB11P47027 764 aaPredicted RBP3.82□□□□□ -1.8
RUB1YDR139C SMC3P47037 1230 aa3.82□□□□□ -1.8
RUB1YDR139C AAD10P47182 288 aa3.82□□□□□ -1.8
RUB1YDR139C PIL1P53252 339 aaKnown RBP3.82□□□□□ -1.8
RUB1YDR139C NNF2P53253 936 aa3.82□□□□□ -1.8
RUB1YDR139C RPL42AP0CX27 106 aaKnown RBP3.81□□□□□ -1.8
RUB1YDR139C RPL42BP0CX28 106 aaKnown RBP3.81□□□□□ -1.8
RUB1YDR139C KRS1P15180 591 aaKnown RBP3.81□□□□□ -1.8
RUB1YDR139C UIP3P39547 235 aa3.81□□□□□ -1.8
RUB1YDR139C FMP10P40098 244 aa3.81□□□□□ -1.8
RUB1YDR139C YTP1P53584 459 aa3.81□□□□□ -1.8
RUB1YDR139C BSC5P53755 489 aa3.81□□□□□ -1.8
RUB1YDR139C INN1P53901 409 aa3.81□□□□□ -1.8
RUB1YDR139C INA17Q02888 182 aa3.81□□□□□ -1.8
RUB1YDR139C IZH1Q03419 316 aa3.81□□□□□ -1.8
RUB1YDR139C ARP10Q04549 284 aa3.81□□□□□ -1.8
RUB1YDR139C UTP21Q06078 939 aaPredicted RBP3.81□□□□□ -1.8
RUB1YDR139C SNA4Q07549 140 aa3.81□□□□□ -1.8
RUB1YDR139C MLH2Q07980 695 aa3.81□□□□□ -1.8
RUB1YDR139C PRE8P23639 250 aa3.8□□□□□ -1.8
RUB1YDR139C YKL050CP35736 922 aa3.8□□□□□ -1.8
RUB1YDR139C STV1P37296 890 aa3.8□□□□□ -1.8
RUB1YDR139C MNN2P38069 597 aa3.8□□□□□ -1.8
RUB1YDR139C RFC1P38630 861 aaKnown RBP3.8□□□□□ -1.8
RUB1YDR139C YNG2P38806 282 aaKnown RBP3.8□□□□□ -1.8
RUB1YDR139C YIL152WP40455 235 aa3.8□□□□□ -1.8
RUB1YDR139C DPH1P40487 425 aaKnown RBP3.8□□□□□ -1.8
RUB1YDR139C ARC1P46672 376 aaKnown RBP3.8□□□□□ -1.8
RUB1YDR139C SIP4P46954 829 aa3.8□□□□□ -1.8
RUB1YDR139C MEP3P53390 489 aa3.8□□□□□ -1.8
RUB1YDR139C YNL181WP53878 407 aa3.8□□□□□ -1.8
RUB1YDR139C YMR178WQ03219 274 aaKnown RBP3.8□□□□□ -1.8
RUB1YDR139C ARP9Q05123 467 aa3.8□□□□□ -1.8
RUB1YDR139C APL4Q12028 832 aa3.8□□□□□ -1.8
RUB1YDR139C ATG9Q12142 997 aa3.8□□□□□ -1.8
RUB1YDR139C INP53Q12271 1107 aa3.8□□□□□ -1.8
RUB1YDR139C SKM1Q12469 655 aa3.8□□□□□ -1.8
RUB1YDR139C CBP1P07252 654 aa3.79□□□□□ -1.8
RUB1YDR139C RPB8P20436 146 aa3.79□□□□□ -1.8
RUB1YDR139C SPE2P21182 396 aa3.79□□□□□ -1.8
RUB1YDR139C MCM10P32354 571 aa3.79□□□□□ -1.8
RUB1YDR139C PDB1P32473 366 aaKnown RBP3.79□□□□□ -1.8
RUB1YDR139C LEU5P38702 357 aa3.79□□□□□ -1.8
RUB1YDR139C DIA4P38705 446 aaPredicted RBP3.79□□□□□ -1.8
RUB1YDR139C SGF73P53165 657 aa3.79□□□□□ -1.8
RUB1YDR139C LSC1P53598 329 aaKnown RBP3.79□□□□□ -1.8
RUB1YDR139C YNL234WP53857 426 aa3.79□□□□□ -1.8
RUB1YDR139C NUP53Q03790 475 aa3.79□□□□□ -1.8
RUB1YDR139C YMR034CQ05131 434 aaPredicted RBP3.79□□□□□ -1.8
RUB1YDR139C PSR1Q07800 427 aa3.79□□□□□ -1.8
RUB1YDR139C RIX7Q07844 837 aaKnown RBP3.79□□□□□ -1.8
RUB1YDR139C ENT4Q07872 247 aa3.79□□□□□ -1.8
RUB1YDR139C SRL1Q08673 210 aa3.79□□□□□ -1.8
RUB1YDR139C BUD7Q08754 746 aa3.79□□□□□ -1.8
RUB1YDR139C CDC24P11433 854 aaPredicted RBP3.78□□□□□ -1.8
RUB1YDR139C GAC1P28006 793 aa3.78□□□□□ -1.8
RUB1YDR139C MIA40P36046 403 aa3.78□□□□□ -1.8
RUB1YDR139C SNU114P36048 1008 aaKnown RBP3.78□□□□□ -1.8
RUB1YDR139C ARC40P38328 384 aaKnown RBP3.78□□□□□ -1.8
RUB1YDR139C BUR6P40096 142 aa3.78□□□□□ -1.8
RUB1YDR139C CTL1Q03220 320 aaKnown RBP3.78□□□□□ -1.8
RUB1YDR139C YLR281CQ05863 155 aa3.78□□□□□ -1.8
RUB1YDR139C YOR111WQ99210 232 aa3.78□□□□□ -1.8
RUB1YDR139C EDE1P34216 1381 aa3.77□□□□□ -1.81
RUB1YDR139C VMA16P23968 213 aa3.77□□□□□ -1.81
RUB1YDR139C LCB1P25045 558 aaKnown RBP3.77□□□□□ -1.81
RUB1YDR139C AGP2P38090 596 aa3.77□□□□□ -1.81
RUB1YDR139C RPS7BP48164 190 aaKnown RBP3.77□□□□□ -1.81
RUB1YDR139C ESBP6P53918 673 aa3.77□□□□□ -1.81
RUB1YDR139C RAD30Q04049 632 aa3.77□□□□□ -1.81
RUB1YDR139C YOL159CQ08300 171 aa3.77□□□□□ -1.81
RUB1YDR139C TCO89Q08921 799 aa3.77□□□□□ -1.81
RUB1YDR139C NKP1Q12493 238 aa3.77□□□□□ -1.81
RUB1YDR139C YFL068WP0CX99 160 aa3.76□□□□□ -1.81
RUB1YDR139C YLL066W-AP0CY00 160 aa3.76□□□□□ -1.81
RUB1YDR139C YLL067W-AP0CY01 160 aa3.76□□□□□ -1.81
RUB1YDR139C PWP1P21304 576 aaKnown RBP3.76□□□□□ -1.81
RUB1YDR139C YCR043CP25361 127 aa3.76□□□□□ -1.81
RUB1YDR139C YPK3P38070 525 aa3.76□□□□□ -1.81
RUB1YDR139C RTS1P38903 757 aa3.76□□□□□ -1.81
RUB1YDR139C MET30P39014 640 aa3.76□□□□□ -1.81
RUB1YDR139C VID27P40157 782 aa3.76□□□□□ -1.81
RUB1YDR139C YIL169CP40442 995 aa3.76□□□□□ -1.81
RUB1YDR139C HXT9P40885 567 aa3.76□□□□□ -1.81
RUB1YDR139C IAH1P41734 238 aa3.76□□□□□ -1.81
RUB1YDR139C DIA3P52290 468 aa3.76□□□□□ -1.81
RUB1YDR139C ZDS2P54786 942 aa3.76□□□□□ -1.81
RUB1YDR139C BET4Q00618 327 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms