RNA–Protein interactions for RNA: YBR111C

YSA1, Transcript of Nudix hydrolase family member with ADP-ribose pyrophosphatase activity, yeast

Gene YSA1, Length 696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSA1	YBR111C	INN1	P53901	409 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	YPL068C	Q02749	293 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	ECI1	Q05871	280 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	POS5	Q06892	414 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	GEP3	Q08622	556 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	SKM1	Q12469	655 aa		4.84	□□□□□ -1.63
YSA1	YBR111C	CHO1	P08456	276 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	CDC24	P11433	854 aa	Predicted RBP	4.83	□□□□□ -1.64
YSA1	YBR111C	PRE8	P23639	250 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	YKL050C	P35736	922 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	FLO5	P38894	1075 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	DPH1	P40487	425 aa	Known RBP	4.83	□□□□□ -1.64
YSA1	YBR111C	ASI1	P54074	624 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	YMR178W	Q03219	274 aa	Known RBP	4.83	□□□□□ -1.64
YSA1	YBR111C	FRE3	Q08905	711 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	UBX3	Q12229	455 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	HER1	Q12276	1246 aa		4.83	□□□□□ -1.64
YSA1	YBR111C	KTR3	P38130	404 aa	Predicted RBP	4.82	□□□□□ -1.64
YSA1	YBR111C	VID27	P40157	782 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	YFR020W	P43600	232 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	MPS1	P54199	764 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	ARP10	Q04549	284 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	PSR1	Q07800	427 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	RIX7	Q07844	837 aa	Known RBP	4.82	□□□□□ -1.64
YSA1	YBR111C	GSH2	Q08220	491 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	ATG9	Q12142	997 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	INP53	Q12271	1107 aa		4.82	□□□□□ -1.64
YSA1	YBR111C	YER145C-A	A0A023PYF4	145 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	SPE2	P21182	396 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	GAC1	P28006	793 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	SNU114	P36048	1008 aa	Known RBP	4.81	□□□□□ -1.64
YSA1	YBR111C	AGP2	P38090	596 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	PCL6	P40038	420 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	SVL3	Q03088	825 aa	Known RBP	4.81	□□□□□ -1.64
YSA1	YBR111C	MCP2	Q06567	569 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	APL4	Q12028	832 aa		4.81	□□□□□ -1.64
YSA1	YBR111C	RPL19A	P0CX82	189 aa	Known RBP	4.8	□□□□□ -1.64
YSA1	YBR111C	RPL19B	P0CX83	189 aa	Predicted RBP	4.8	□□□□□ -1.64
YSA1	YBR111C	CHS3	P29465	1165 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	MIA40	P36046	403 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YIR016W	P40572	265 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	IRC8	P47046	822 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YGL036W	P53185	909 aa	Predicted RBP	4.8	□□□□□ -1.64
YSA1	YBR111C	NNF2	P53253	936 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	BOP3	P53958	396 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YKU80	Q04437	629 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YDL121C	Q07541	149 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YAP7	Q08182	245 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	ETT1	Q08421	412 aa	Known RBP	4.8	□□□□□ -1.64
YSA1	YBR111C	TCO89	Q08921	799 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	YOR111W	Q99210	232 aa		4.8	□□□□□ -1.64
YSA1	YBR111C	CDC16	P09798	840 aa		4.79	□□□□□ -1.64
YSA1	YBR111C	PWP1	P21304	576 aa	Known RBP	4.79	□□□□□ -1.64
YSA1	YBR111C	ATO2	P32907	282 aa		4.79	□□□□□ -1.64
YSA1	YBR111C	NOP16	P40007	231 aa	Known RBP	4.79	□□□□□ -1.64
YSA1	YBR111C	SUB1	P54000	292 aa	Known RBP	4.79	□□□□□ -1.64
YSA1	YBR111C	ZDS2	P54786	942 aa		4.79	□□□□□ -1.64
YSA1	YBR111C	UTP21	Q06078	939 aa	Predicted RBP	4.79	□□□□□ -1.64
YSA1	YBR111C	ENT4	Q07872	247 aa		4.79	□□□□□ -1.64
YSA1	YBR111C	SEM1	O94742	89 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	VMA16	P23968	213 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	ADH7	P25377	361 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	PAH1	P32567	862 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	SAC6	P32599	642 aa	Known RBP	4.78	□□□□□ -1.64
YSA1	YBR111C	LEU5	P38702	357 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	RTS1	P38903	757 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	LYS20	P48570	428 aa	Known RBP	4.78	□□□□□ -1.64
YSA1	YBR111C	STR3	P53101	465 aa	Known RBP	4.78	□□□□□ -1.64
YSA1	YBR111C	YTP1	P53584	459 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	YNL181W	P53878	407 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	YSA1	Q01976	231 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	CTL1	Q03220	320 aa	Known RBP	4.78	□□□□□ -1.64
YSA1	YBR111C	YLR281C	Q05863	155 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	DSE3	Q08729	430 aa		4.78	□□□□□ -1.64
YSA1	YBR111C	NOP4	P37838	685 aa	Known RBP	4.77	□□□□□ -1.65
YSA1	YBR111C	GND1	P38720	489 aa	Known RBP	4.77	□□□□□ -1.65
YSA1	YBR111C	YIL152W	P40455	235 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	SGM1	P47166	707 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	DIA3	P52290	468 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	MAK10	Q02197	733 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	RAD30	Q04049	632 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	ARP9	Q05123	467 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	MLH2	Q07980	695 aa		4.77	□□□□□ -1.65
YSA1	YBR111C	RPB8	P20436	146 aa		4.76	□□□□□ -1.65
YSA1	YBR111C	YBL029W	P38201	376 aa		4.76	□□□□□ -1.65
YSA1	YBR111C	RFC1	P38630	861 aa	Known RBP	4.76	□□□□□ -1.65
YSA1	YBR111C	BUR6	P40096	142 aa		4.76	□□□□□ -1.65
YSA1	YBR111C	YLR112W	Q12130	139 aa		4.76	□□□□□ -1.65
YSA1	YBR111C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
YSA1	YBR111C	NOP58	Q12499	511 aa	Known RBP	4.76	□□□□□ -1.65
YSA1	YBR111C	GFD2	P25370	566 aa	Known RBP	4.75	□□□□□ -1.65
YSA1	YBR111C	MUD2	P36084	527 aa	Known RBP	4.75	□□□□□ -1.65
YSA1	YBR111C	STV1	P37296	890 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	MNN2	P38069	597 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	VRG4	P40107	337 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	TMA108	P40462	946 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	IAH1	P41734	238 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	ATG26	Q06321	1198 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	CIR2	Q08822	631 aa		4.75	□□□□□ -1.65
YSA1	YBR111C	YDR056C	Q12025	205 aa		4.75	□□□□□ -1.65

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