RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C POT1P27796 417 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
ATG8YBL078C ERV1P27882 189 aa4.47□□□□□ -1.69
ATG8YBL078C URA7P28274 579 aaKnown RBP4.47□□□□□ -1.69
ATG8YBL078C SWC3P31376 625 aa4.47□□□□□ -1.69
ATG8YBL078C PUP2P32379 260 aa4.47□□□□□ -1.69
ATG8YBL078C DCG1P32460 244 aa4.47□□□□□ -1.69
ATG8YBL078C AUR1P36107 401 aaPredicted RBP4.47□□□□□ -1.69
ATG8YBL078C LAS1P36146 502 aaPredicted RBP4.47□□□□□ -1.69
ATG8YBL078C FTH1P38310 465 aa4.47□□□□□ -1.69
ATG8YBL078C RPP1P38786 293 aa4.47□□□□□ -1.69
ATG8YBL078C MET28P40573 187 aa4.47□□□□□ -1.69
ATG8YBL078C CHA4P43634 648 aa4.47□□□□□ -1.69
ATG8YBL078C ROK1P45818 564 aaPredicted RBP4.47□□□□□ -1.69
ATG8YBL078C PHO23P50947 330 aa4.47□□□□□ -1.69
ATG8YBL078C FDC1Q03034 503 aa4.47□□□□□ -1.69
ATG8YBL078C YML037CQ03703 340 aa4.47□□□□□ -1.69
ATG8YBL078C DIA2Q08496 732 aaPredicted RBP4.47□□□□□ -1.69
ATG8YBL078C PUS9Q12069 462 aa4.47□□□□□ -1.69
ATG8YBL078C GPM3Q12326 303 aa4.47□□□□□ -1.69
ATG8YBL078C PNS1Q12412 539 aa4.47□□□□□ -1.69
ATG8YBL078C PMA1P05030 918 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C RPS24AP0CX31 135 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C RPS24BP0CX32 135 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C MDH1P17505 334 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
ATG8YBL078C PEX1P24004 1043 aa4.46□□□□□ -1.7
ATG8YBL078C FEN2P25621 512 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C YCR051WP25631 222 aa4.46□□□□□ -1.7
ATG8YBL078C URK1P27515 501 aa4.46□□□□□ -1.7
ATG8YBL078C PMI40P29952 429 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C SMI1P32566 505 aa4.46□□□□□ -1.7
ATG8YBL078C GEX2P36173 615 aa4.46□□□□□ -1.7
ATG8YBL078C YJL193WP39542 402 aa4.46□□□□□ -1.7
ATG8YBL078C LRO1P40345 661 aa4.46□□□□□ -1.7
ATG8YBL078C YIL161WP40449 235 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C MAF1P41910 395 aa4.46□□□□□ -1.7
ATG8YBL078C MSE1P48525 536 aa4.46□□□□□ -1.7
ATG8YBL078C NCS6P53088 359 aa4.46□□□□□ -1.7
ATG8YBL078C YGL036WP53185 909 aaPredicted RBP4.46□□□□□ -1.7
ATG8YBL078C YNL058CP53947 316 aa4.46□□□□□ -1.7
ATG8YBL078C MTG1Q03151 367 aaPredicted RBP4.46□□□□□ -1.7
ATG8YBL078C ARX1Q03862 593 aaKnown RBP4.46□□□□□ -1.7
ATG8YBL078C CRF1Q04930 467 aa4.46□□□□□ -1.7
ATG8YBL078C ARR3Q06598 404 aa4.46□□□□□ -1.7
ATG8YBL078C YFT2Q06676 274 aa4.46□□□□□ -1.7
ATG8YBL078C PEX19Q07418 342 aa4.46□□□□□ -1.7
ATG8YBL078C YEH1Q07804 573 aa4.46□□□□□ -1.7
ATG8YBL078C BUD7Q08754 746 aa4.46□□□□□ -1.7
ATG8YBL078C TCO89Q08921 799 aa4.46□□□□□ -1.7
ATG8YBL078C SLM3Q12093 417 aa4.46□□□□□ -1.7
ATG8YBL078C YJR112W-AQ3E743 109 aa4.46□□□□□ -1.7
ATG8YBL078C ISN1Q99312 450 aa4.46□□□□□ -1.7
ATG8YBL078C AUS1Q08409 1394 aa4.45□□□□□ -1.7
ATG8YBL078C DSS4P32601 143 aa4.45□□□□□ -1.7
ATG8YBL078C VID24P38263 362 aa4.45□□□□□ -1.7
ATG8YBL078C TIF4631P39935 952 aaKnown RBP4.45□□□□□ -1.7
ATG8YBL078C IME4P41833 600 aa4.45□□□□□ -1.7
ATG8YBL078C FYV8P46949 817 aaKnown RBP4.45□□□□□ -1.7
ATG8YBL078C TCB2P48231 1178 aa4.45□□□□□ -1.7
ATG8YBL078C RFX1P48743 811 aa4.45□□□□□ -1.7
ATG8YBL078C CUL3P53202 744 aa4.45□□□□□ -1.7
ATG8YBL078C CTK1Q03957 528 aaKnown RBP4.45□□□□□ -1.7
ATG8YBL078C ROY1Q04847 553 aa4.45□□□□□ -1.7
ATG8YBL078C AFI1Q99222 893 aa4.45□□□□□ -1.7
ATG8YBL078C YPT6Q99260 215 aa4.45□□□□□ -1.7
ATG8YBL078C MLP1Q02455 1875 aaKnown RBP4.45□□□□□ -1.7
ATG8YBL078C RRP5Q05022 1729 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C LAT1P12695 482 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C CAF20P12962 161 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C PAP1P29468 568 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C BCS1P32839 456 aa4.44□□□□□ -1.7
ATG8YBL078C GND1P38720 489 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C CCT6P39079 546 aa4.44□□□□□ -1.7
ATG8YBL078C BUD16P39988 312 aa4.44□□□□□ -1.7
ATG8YBL078C SEC24P40482 926 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C BUD27P43573 796 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
ATG8YBL078C YGR054WP53235 642 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
ATG8YBL078C SPE3Q12074 293 aaKnown RBP4.44□□□□□ -1.7
ATG8YBL078C SWT1Q12104 458 aa4.44□□□□□ -1.7
ATG8YBL078C YRF1-2P40105 1681 aa4.44□□□□□ -1.7
ATG8YBL078C RSF2P46974 1380 aa4.43□□□□□ -1.7
ATG8YBL078C DFR1P07807 211 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
ATG8YBL078C REC107P21651 314 aa4.43□□□□□ -1.7
ATG8YBL078C YCR061WP25639 631 aa4.43□□□□□ -1.7
ATG8YBL078C SIF2P38262 535 aa4.43□□□□□ -1.7
ATG8YBL078C YHR097CP38809 366 aaKnown RBP4.43□□□□□ -1.7
ATG8YBL078C FKH2P41813 862 aa4.43□□□□□ -1.7
ATG8YBL078C OCA1P50946 238 aaPredicted RBP4.43□□□□□ -1.7
ATG8YBL078C YGR066CP53242 292 aa4.43□□□□□ -1.7
ATG8YBL078C SUN4P53616 420 aa4.43□□□□□ -1.7
ATG8YBL078C TOF1P53840 1238 aa4.43□□□□□ -1.7
ATG8YBL078C EOS1P53938 366 aa4.43□□□□□ -1.7
ATG8YBL078C YDR239CQ03780 787 aa4.43□□□□□ -1.7
ATG8YBL078C RPC11Q04307 110 aaPredicted RBP4.43□□□□□ -1.7
ATG8YBL078C MRD1Q06106 887 aaKnown RBP4.43□□□□□ -1.7
ATG8YBL078C MMR1Q06324 491 aa4.43□□□□□ -1.7
ATG8YBL078C NPC2Q12408 173 aa4.43□□□□□ -1.7
ATG8YBL078C RPO41P13433 1351 aaKnown RBP4.42□□□□□ -1.7
ATG8YBL078C YML003WP0CF16 290 aa4.42□□□□□ -1.7
ATG8YBL078C CPR2P23285 205 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms