RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YLR111WQ12528 110 aa8.74□□□□□ -1.01
NME1NME1 HOM2P13663 365 aaKnown RBP8.73□□□□□ -1.01
NME1NME1 PWP1P21304 576 aaKnown RBP8.73□□□□□ -1.01
NME1NME1 DIA4P38705 446 aaPredicted RBP8.73□□□□□ -1.01
NME1NME1 NPR2P39923 615 aa8.73□□□□□ -1.01
NME1NME1 ARF3P40994 183 aaRIP-Chip data8.73□□□□□ -1.01not detected
NME1NME1 LYS4P49367 693 aaPredicted RBP8.73□□□□□ -1.01
NME1NME1 BUD22Q04347 519 aaKnown RBP8.73□□□□□ -1.01
NME1NME1 PGS1P25578 521 aa8.72□□□□□ -1.01
NME1NME1 UIP3P39547 235 aa8.72□□□□□ -1.01
NME1NME1 CDC1P40986 491 aa8.72□□□□□ -1.01
NME1NME1 DIA3P52290 468 aa8.72□□□□□ -1.01
NME1NME1 SPC19Q03954 165 aa8.72□□□□□ -1.01
NME1NME1 INP53Q12271 1107 aa8.72□□□□□ -1.01
NME1NME1 ERG11P10614 530 aa8.71□□□□□ -1.02
NME1NME1 YIH1P25637 258 aa8.71□□□□□ -1.02
NME1NME1 AFG3P39925 761 aa8.71□□□□□ -1.02
NME1NME1 RMD8P43620 662 aa8.71□□□□□ -1.02
NME1NME1 PFA5Q03289 374 aa8.71□□□□□ -1.02
NME1NME1 CBS1P14066 229 aa8.7□□□□□ -1.02
NME1NME1 OCA4P25366 362 aa8.7□□□□□ -1.02
NME1NME1 ADH7P25377 361 aa8.7□□□□□ -1.02
NME1NME1 LCL3P53153 274 aa8.7□□□□□ -1.02
NME1NME1 PDR8Q06149 701 aa8.7□□□□□ -1.02
NME1NME1 YLR455WQ06188 304 aa8.7□□□□□ -1.02
NME1NME1 SPE4Q12455 300 aa8.7□□□□□ -1.02
NME1NME1 SPE2P21182 396 aa8.69□□□□□ -1.02
NME1NME1 URE2P23202 354 aaKnown RBP8.69□□□□□ -1.02
NME1NME1 YCR006CP25350 157 aa8.69□□□□□ -1.02
NME1NME1 REG2P38232 338 aa8.69□□□□□ -1.02
NME1NME1 IRC7P43623 340 aa8.69□□□□□ -1.02
NME1NME1 SMC3P47037 1230 aa8.69□□□□□ -1.02
NME1NME1 ARD1P07347 238 aaPredicted RBP8.68□□□□□ -1.02
NME1NME1 RAP1P11938 827 aa8.68□□□□□ -1.02
NME1NME1 YKL050CP35736 922 aa8.68□□□□□ -1.02
NME1NME1 OCT1P35999 772 aa8.68□□□□□ -1.02
NME1NME1 SNU114P36048 1008 aaKnown RBP8.68□□□□□ -1.02
NME1NME1 UTP9P38882 575 aaKnown RBP8.68□□□□□ -1.02
NME1NME1 RGI2P40188 164 aa8.68□□□□□ -1.02
NME1NME1 SGM1P47166 707 aa8.68□□□□□ -1.02
NME1NME1 NNF2P53253 936 aa8.68□□□□□ -1.02
NME1NME1 YEH1Q07804 573 aa8.68□□□□□ -1.02
NME1NME1 MCH4Q08268 501 aa8.68□□□□□ -1.02
NME1NME1 ATG9Q12142 997 aa8.68□□□□□ -1.02
NME1NME1 ARG3P05150 338 aa8.67□□□□□ -1.02
NME1NME1 ARN1P38731 627 aa8.67□□□□□ -1.02
NME1NME1 ZDS2P54786 942 aa8.67□□□□□ -1.02
NME1NME1 YLR287CQ05881 355 aa8.67□□□□□ -1.02
NME1NME1 YJR112W-AQ3E743 109 aa8.67□□□□□ -1.02
NME1NME1 ORC2P32833 620 aa8.66□□□□□ -1.02
NME1NME1 SPO22P40511 975 aa8.66□□□□□ -1.02
NME1NME1 YGR066CP53242 292 aa8.66□□□□□ -1.02
NME1NME1 TAF11Q04226 346 aa8.66□□□□□ -1.02
NME1NME1 YPL272CQ08984 517 aa8.66□□□□□ -1.02
NME1NME1 GET3Q12154 354 aaKnown RBP8.66□□□□□ -1.02
NME1NME1 HSH49Q99181 213 aaPredicted RBP8.66□□□□□ -1.02
NME1NME1 CHO1P08456 276 aa8.65□□□□□ -1.02
NME1NME1 MNN2P38069 597 aa8.65□□□□□ -1.02
NME1NME1 YJL107CP42947 387 aa8.65□□□□□ -1.02
NME1NME1 APL4Q12028 832 aa8.65□□□□□ -1.02
NME1NME1 SCM3Q12334 223 aa8.65□□□□□ -1.02
NME1NME1 YPT6Q99260 215 aa8.65□□□□□ -1.02
NME1NME1 GPA1P08539 472 aa8.64□□□□□ -1.03
NME1NME1 CKA1P15790 372 aa8.64□□□□□ -1.03
NME1NME1 SAC1P32368 623 aaKnown RBP8.64□□□□□ -1.03
NME1NME1 TPA1P40032 644 aaKnown RBP8.64□□□□□ -1.03
NME1NME1 SNO3P43544 222 aa8.64□□□□□ -1.03
NME1NME1 MAK10Q02197 733 aa8.64□□□□□ -1.03
NME1NME1 LUC7Q07508 261 aaPredicted RBP8.64□□□□□ -1.03
NME1NME1 FMP40Q08968 688 aaPredicted RBP8.64□□□□□ -1.03
NME1NME1 FOB1O13329 566 aa8.63□□□□□ -1.03
NME1NME1 MF(ALPHA)1P01149 165 aa8.63□□□□□ -1.03
NME1NME1 NUP1P20676 1076 aa8.63□□□□□ -1.03
NME1NME1 TKL1P23254 680 aaKnown RBP8.63□□□□□ -1.03
NME1NME1 PEX2P32800 271 aa8.63□□□□□ -1.03
NME1NME1 SRO77P38163 1010 aa8.63□□□□□ -1.03
NME1NME1 NMD5P46970 1048 aa8.63□□□□□ -1.03
NME1NME1 IRC8P47046 822 aa8.63□□□□□ -1.03
NME1NME1 VID30P53076 958 aa8.63□□□□□ -1.03
NME1NME1 YMR178WQ03219 274 aaKnown RBP8.63□□□□□ -1.03
NME1NME1 LEU9Q12166 604 aaKnown RBP8.63□□□□□ -1.03
NME1NME1 FRE7Q12333 620 aa8.63□□□□□ -1.03
NME1NME1 YER145C-AA0A023PYF4 145 aa8.62□□□□□ -1.03
NME1NME1 MBR1P23493 339 aa8.62□□□□□ -1.03
NME1NME1 COQ3P27680 312 aa8.62□□□□□ -1.03
NME1NME1 PXL1P36166 706 aa8.62□□□□□ -1.03
NME1NME1 CCT6P39079 546 aa8.62□□□□□ -1.03
NME1NME1 SYF1Q04048 859 aaPredicted RBP8.62□□□□□ -1.03
NME1NME1 PIG1Q06216 648 aa8.62□□□□□ -1.03
NME1NME1 BUD7Q08754 746 aa8.62□□□□□ -1.03
NME1NME1 RED1P14291 827 aa8.61□□□□□ -1.03
NME1NME1 FUR1P18562 216 aaKnown RBP8.61□□□□□ -1.03
NME1NME1 APN1P22936 367 aa8.61□□□□□ -1.03
NME1NME1 LCB1P25045 558 aaKnown RBP8.61□□□□□ -1.03
NME1NME1 ELO1P39540 310 aa8.61□□□□□ -1.03
NME1NME1 VTC2P43585 828 aa8.61□□□□□ -1.03
NME1NME1 FAR3P46671 204 aa8.61□□□□□ -1.03
NME1NME1 UBP8P50102 471 aa8.61□□□□□ -1.03
NME1NME1 YGR127WP53275 312 aa8.61□□□□□ -1.03
NME1NME1 EFM6P53970 246 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms