RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 GTF2IP78347 998 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 RASGRP2Q7LDG7 609 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 MLKLQ8NB16 471 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 FANCLQ9NW38 375 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 ATP6V0A2Q9Y487 856 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
CPNE4-211ENST00000514439 MYO1BO43795 1136 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 SERPINC1P01008 464 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 AFMP43652 599 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 UBASH3AP57075 661 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 FMR1Q06787 632 aaKnown RBP eCLIP9.34□□□□□ -0.91
CPNE4-211ENST00000514439 WWC2Q6AWC2 1192 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 ARMCX5Q6P1M9 558 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 CCDC150Q8NCX0 1101 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 DPF2Q92785 391 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 CCDC34Q96HJ3 373 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
CPNE4-211ENST00000514439 ANKRD31Q8N7Z5 1873 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CBFA2T2O43439 604 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 TPD52L1Q16890 204 aaPredicted RBP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CCDC148Q8NFR7 591 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 PAGE5Q96GU1 130 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 KLRF2D3W0D1 207 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 F8W031 263 aaPredicted RBP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 M0R2N6 131 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 STXBP3O00186 592 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 SRGNP10124 158 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 SFPQP23246 707 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CASP1P29466 404 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 GTF2F1P35269 517 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 IL17AQ16552 155 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CFAP100Q494V2 611 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 COL23A1Q86Y22 540 aaPredicted RBP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
CPNE4-211ENST00000514439 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CERS5Q8N5B7 392 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 DAGLBQ8NCG7 672 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CEP95Q96GE4 821 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 LZTS2Q9BRK4 669 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 BARHL2Q9NY43 387 aa9.33□□□□□ -0.92
CPNE4-211ENST00000514439 CCDC194A0A1B0GVG4 234 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 TNNT1P13805 278 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 NPR1P16066 1061 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 DPYDQ12882 1025 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 PICALMQ13492 652 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 E2F4Q16254 413 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 HSP90AA4PQ58FG1 418 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 C4orf32Q8N8J7 132 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 ENOX1Q8TC92 643 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 MED15Q96RN5 788 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 CPVLQ9H3G5 476 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 PCDHA6Q9UN73 950 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 NFE2L3Q9Y4A8 694 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 PCDHA8Q9Y5H6 950 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 TMEM232C9JQI7 657 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 TOP1P11387 765 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 ZNF18P17022 549 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 DSG3P32926 999 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 RBM10P98175 930 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 DHX8Q14562 1220 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 GALNT17Q6IS24 598 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 VSTM4Q8IW00 320 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
CPNE4-211ENST00000514439 INTS13Q9NVM9 706 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 SUGT1Q9Y2Z0 365 aa9.32□□□□□ -0.92
CPNE4-211ENST00000514439 RIOK3O14730 519 aaKnown RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 DPP8Q6V1X1 898 aaPredicted RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 CCAR2Q8N163 923 aaKnown RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 IQUBQ8NA54 791 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 MXD3Q9BW11 206 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 DDX4Q9NQI0 724 aaKnown RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 KCND1Q9NSA2 647 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 PLIN4Q96Q06 1357 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 MYH1P12882 1939 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 PLSCR1O15162 318 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 MMP10P09238 476 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 LONP1P36776 959 aaKnown RBP9.31□□□□□ -0.92
CPNE4-211ENST00000514439 NOVP48745 357 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 NAPAP54920 295 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 GABPAQ06546 454 aa9.31□□□□□ -0.92
CPNE4-211ENST00000514439 PTPN21Q16825 1174 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms