RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
USP1-204ENST00000452143 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 SEPT4O43236 478 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 PRKAB2O43741 272 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 DEFB123Q8N688 67 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 TRPV1Q8NER1 839 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 ATG4CQ96DT6 458 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
USP1-204ENST00000452143 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
USP1-204ENST00000452143 USP17L12C9JPN9 530 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 USP17L21D6R901 530 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 SLC25A27O95847 323 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 FCER1AP12319 257 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 CDK8P49336 464 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 CLCN6P51797 869 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 PLS1Q14651 629 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 CLEC10AQ8IUN9 316 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 MAML3Q96JK9 1138 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
USP1-204ENST00000452143 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 PRKAG2Q9UGJ0 569 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
USP1-204ENST00000452143 COBLO75128 1261 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
USP1-204ENST00000452143 COPB2P35606 906 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.32
USP1-204ENST00000452143 SNX17Q15036 470 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 ADAMTS5Q9UNA0 930 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 STXBP5LQ9Y2K9 1186 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.32
USP1-204ENST00000452143 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
USP1-204ENST00000452143 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
USP1-204ENST00000452143 RTP1P59025 263 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 GJC2Q5T442 439 aaPredicted RBP13.07□□□□□ -0.32
USP1-204ENST00000452143 C1orf53Q5VUE5 145 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 Q7L0L9 218 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
USP1-204ENST00000452143 SMCHD1A6NHR9 2005 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 KCTD2Q14681 263 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 SBK1Q52WX2 424 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
USP1-204ENST00000452143 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 RIOX2Q8IUF8 465 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 MMP19Q99542 508 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 PUS7LQ9H0K6 701 aaKnown RBP13.06□□□□□ -0.32
USP1-204ENST00000452143 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 MTMR10Q9NXD2 777 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 ZNF214Q9UL59 606 aaPredicted RBP13.06□□□□□ -0.32
USP1-204ENST00000452143 PPP1R9AQ9ULJ8 1098 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 DIS3Q9Y2L1 958 aaKnown RBP13.06□□□□□ -0.32
USP1-204ENST00000452143 CDH23Q9H251 3354 aa13.06□□□□□ -0.32
USP1-204ENST00000452143 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 VWA5AO00534 786 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 CHGBP05060 677 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
USP1-204ENST00000452143 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
USP1-204ENST00000452143 RARBP10826 455 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 STAT3P40763 770 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 LRRC41Q15345 812 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 FAM83BQ5T0W9 1011 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
USP1-204ENST00000452143 KBTBD3Q8NAB2 608 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 APPBP2Q92624 585 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 STRBPQ96SI9 672 aaKnown RBP13.04□□□□□ -0.32
USP1-204ENST00000452143 TINF2Q9BSI4 451 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP1-204ENST00000452143 TEX13BQ9BXU2 312 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 SYNPO2Q9UMS6 1093 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
USP1-204ENST00000452143 POTEB2H3BUK9 544 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 DLL1O00548 723 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 GNAT2P19087 354 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 RASA1P20936 1047 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 ADCYAP1R1P41586 468 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 RNF180Q86T96 592 aa13.03□□□□□ -0.32
USP1-204ENST00000452143 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms