RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Tas2r124Q7M718 309 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Atxn2lQ7TQH0 1049 aaKnown RBP13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Hook3Q8BUK6 718 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Lman1lQ8VCD3 505 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Hps3Q91VB4 1002 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Mst1rQ62190 1378 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Nme9A0A1L1SUL6 329 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rpl13P47963 211 aaKnown RBP13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Grm1P97772 1199 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 ErmnQ5EBJ4 281 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Znf467Q8JZL0 594 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Atxn7Q8R4I1 867 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rrp1P56183 494 aaKnown RBP13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ccdc42Q5SV66 316 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 HarsQ61035 509 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Usp44Q8C2S0 711 aa13.44□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Apol10bG3X9K7 334 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Axin2O88566 840 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Aimp1P31230 310 aaKnown RBP13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Pald1P70261 859 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Psmd1Q3TXS7 953 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cep63Q3UPP8 700 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Nap1l4Q78ZA7 375 aaKnown RBP13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Slc7a6osQ7TPE5 306 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Traf3ip3Q8C0G2 513 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Xpo5Q924C1 1204 aaKnown RBP13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Pex11aQ9Z211 246 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ubn2Q80WC1 1314 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 PrkcshO08795 521 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rad51bO35719 350 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Idh1O88844 414 aaKnown RBP13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cd22P35329 862 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Traf5P70191 558 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ubxn2bQ0KL01 331 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Krt87Q6IMF0 495 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Depdc1bQ8BH88 529 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 SowahdQ8BY98 327 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Trex1Q91XB0 314 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Kmt5aQ2YDW7 349 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Usp28Q5I043 1051 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ccdc85aQ5SP85 500 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Lamc2Q61092 1191 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Swap70Q6A028 585 aaKnown RBP13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Q8BZJ8 459 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 NelfbQ8C4Y3 580 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Bcs1lQ9CZP5 418 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Diaph1O08808 1255 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Mapk4Q6P5G0 583 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rab11fip4Q8BQP8 635 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Trappc12Q8K2L8 797 aa13.43□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Trappc10Q3TLI0 1259 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Gas8Q60779 478 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Galnt17Q7TT15 598 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Stac3Q8BZ71 360 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Krtap5-3Q9D226 196 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Uso1Q9Z1Z0 959 aaKnown RBP13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Sik3Q6P4S6 1311 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Nrxn1Q9CS84 1514 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Zfp317Q8C0Q5 607 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Plcg2Q8CIH5 1265 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ppp1r16bQ8VHQ3 568 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Acot3Q9QYR7 432 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cfap70D3YVL2 1141 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Pank2Q3U4S0 443 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ppp1r1bQ60829 194 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Lrrc41Q8K1C9 807 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Stx17Q9D0I4 301 aa13.42□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Dact3Q0PHV7 610 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Otud5Q3U2S4 566 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Lin9Q8C735 542 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Sulf1Q8K007 870 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Efhd1Q9D4J1 240 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Bnip3lQ9Z2F7 218 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cyp3a59D3Z2W7 503 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Stag2O35638 1231 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Hdhd2Q3UGR5 259 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Edrf1Q6GQV7 1239 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Brd3Q8K2F0 726 aaKnown RBP13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Xpo4Q9ESJ0 1151 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Eef2kO08796 724 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 P4hbP09103 509 aaKnown RBP13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cct6aP80317 531 aaKnown RBP13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Nucb2P81117 420 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Scg2Q03517 617 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Dhx37Q6NZL1 1150 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ube2oQ6ZPJ3 1288 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Crybg3Q80W49 1005 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Serpinb13Q8CDC0 389 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Scyl2Q8CFE4 930 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ndufv1Q91YT0 464 aa13.41□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Slc39a2G3X943 309 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Tspyl1O88852 379 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ctdnep1Q3TP92 244 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rc3h1Q4VGL6 1130 aaKnown RBP13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ahcyl2Q68FL4 613 aaKnown RBP13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Tldc2A2ACG1 198 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Bpifb4A2BGH0 617 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rsbn1lD3Z0K6 821 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Zfp51Q3U4L8 781 aa13.4□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Gm2163Q6PCY5 473 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms