RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	YCL049C	P25577	312 aa		0.17	□□□□□ -2.38
snR45	snR45	CDC60	P26637	1090 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.17	□□□□□ -2.38	not detected
snR45	snR45	FRD1	P32614	470 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	WBP1	P33767	430 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	BMT2	P38278	337 aa		0.17	□□□□□ -2.38
snR45	snR45	ENP1	P38333	483 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	UME6	P39001	836 aa		0.17	□□□□□ -2.38
snR45	snR45	CSM2	P40465	213 aa		0.17	□□□□□ -2.38
snR45	snR45	NOP2	P40991	618 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	DUG1	P43616	481 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	UBX6	P47049	396 aa		0.17	□□□□□ -2.38
snR45	snR45	VPS25	P47142	202 aa		0.17	□□□□□ -2.38
snR45	snR45	MET13	P53128	600 aa		0.17	□□□□□ -2.38
snR45	snR45	YNL092W	P53934	400 aa		0.17	□□□□□ -2.38
snR45	snR45	ADE16	P54113	591 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	MTD1	Q02046	320 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	RAD33	Q04231	177 aa		0.17	□□□□□ -2.38
snR45	snR45	CRF1	Q04930	467 aa		0.17	□□□□□ -2.38
snR45	snR45	RRP15	Q06511	250 aa	Predicted RBP	0.17	□□□□□ -2.38
snR45	snR45	SLM3	Q12093	417 aa		0.17	□□□□□ -2.38
snR45	snR45	RPO41	P13433	1351 aa	Known RBP	0.17	□□□□□ -2.38
snR45	snR45	IPP1	P00817	287 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	BAR1	P12630	587 aa		0.16	□□□□□ -2.38
snR45	snR45	PFK2	P16862	959 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
snR45	snR45	PRI2	P20457	528 aa		0.16	□□□□□ -2.38
snR45	snR45	GRX1	P25373	110 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	ATG15	P25641	520 aa		0.16	□□□□□ -2.38
snR45	snR45	MSH2	P25847	964 aa		0.16	□□□□□ -2.38
snR45	snR45	PSO2	P30620	661 aa		0.16	□□□□□ -2.38
snR45	snR45	MCM4	P30665	933 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	HSP104	P31539	908 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	RPN2	P32565	945 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	MPE1	P35728	441 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
snR45	snR45	LSM4	P40070	187 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	MOB1	P40484	314 aa		0.16	□□□□□ -2.38
snR45	snR45	YJL132W	P47014	750 aa		0.16	□□□□□ -2.38
snR45	snR45	SGM1	P47166	707 aa		0.16	□□□□□ -2.38
snR45	snR45	TAM41	P53230	385 aa		0.16	□□□□□ -2.38
snR45	snR45	SUR7	P54003	302 aa		0.16	□□□□□ -2.38
snR45	snR45	UBP16	Q02863	499 aa		0.16	□□□□□ -2.38
snR45	snR45	STP3	Q05937	343 aa		0.16	□□□□□ -2.38
snR45	snR45	PIG1	Q06216	648 aa		0.16	□□□□□ -2.38
snR45	snR45	UBX5	Q06682	500 aa		0.16	□□□□□ -2.38
snR45	snR45	FMP45	Q07651	309 aa		0.16	□□□□□ -2.38
snR45	snR45	GUD1	Q07729	489 aa		0.16	□□□□□ -2.38
snR45	snR45	NSE1	Q07913	336 aa		0.16	□□□□□ -2.38
snR45	snR45	YPL272C	Q08984	517 aa		0.16	□□□□□ -2.38
snR45	snR45	CFT2	Q12102	859 aa	Predicted RBP	0.16	□□□□□ -2.38
snR45	snR45	GIN4	Q12263	1142 aa		0.16	□□□□□ -2.38
snR45	snR45	SUL2	Q12325	893 aa		0.16	□□□□□ -2.38
snR45	snR45	YRM1	Q12340	786 aa		0.16	□□□□□ -2.38
snR45	snR45	RRD2	Q12461	358 aa		0.16	□□□□□ -2.38
snR45	snR45	YIL046W-A	Q3E7Z4	54 aa		0.16	□□□□□ -2.38
snR45	snR45	ADE6	P38972	1358 aa	Known RBP	0.16	□□□□□ -2.38
snR45	snR45	RTC1	Q08281	1341 aa		0.15	□□□□□ -2.38
snR45	snR45	RPS14A	P06367	137 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	LPD1	P09624	499 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	SWI6	P09959	803 aa		0.15	□□□□□ -2.39
snR45	snR45	APE1	P14904	514 aa		0.15	□□□□□ -2.39
snR45	snR45	SGF29	P25554	259 aa		0.15	□□□□□ -2.39
snR45	snR45	SER1	P33330	395 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	COY1	P34237	679 aa		0.15	□□□□□ -2.39
snR45	snR45	MCD4	P36051	919 aa		0.15	□□□□□ -2.39
snR45	snR45	ARN1	P38731	627 aa		0.15	□□□□□ -2.39
snR45	snR45	MDM31	P38880	579 aa		0.15	□□□□□ -2.39
snR45	snR45	PCF11	P39081	626 aa	Predicted RBP	0.15	□□□□□ -2.39
snR45	snR45	RPS14B	P39516	138 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	NOC2	P39744	710 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	BIR1	P47134	954 aa		0.15	□□□□□ -2.39
snR45	snR45	YNR061C	P53747	219 aa		0.15	□□□□□ -2.39
snR45	snR45	DNM1	P54861	757 aa		0.15	□□□□□ -2.39
snR45	snR45	PNG1	Q02890	363 aa		0.15	□□□□□ -2.39
snR45	snR45	RSM10	Q03201	203 aa		0.15	□□□□□ -2.39
snR45	snR45	HEL2	Q05580	639 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	JIP5	Q06214	492 aa	Predicted RBP	0.15	□□□□□ -2.39
snR45	snR45	DIB1	Q06819	143 aa	Predicted RBP	0.15	□□□□□ -2.39
snR45	snR45	FMP25	Q08023	583 aa		0.15	□□□□□ -2.39
snR45	snR45	VHS3	Q08438	674 aa		0.15	□□□□□ -2.39
snR45	snR45	CDC53	Q12018	815 aa	Known RBP	0.15	□□□□□ -2.39
snR45	snR45	RRG1	Q12167	365 aa	Predicted RBP	0.15	□□□□□ -2.39
snR45	snR45	RTP1	Q12751	981 aa		0.15	□□□□□ -2.39
snR45	snR45	ADR1	P07248	1323 aa		0.14	□□□□□ -2.39
snR45	snR45	SNF1	P06782	633 aa	Known RBP	0.14	□□□□□ -2.39
snR45	snR45	SSA3	P09435	649 aa	Known RBP	0.14	□□□□□ -2.39
snR45	snR45	NAP1	P25293	417 aa	Known RBP	0.14	□□□□□ -2.39
snR45	snR45	TFB1	P32776	642 aa		0.14	□□□□□ -2.39
snR45	snR45	WSC4	P38739	605 aa		0.14	□□□□□ -2.39
snR45	snR45	KEL1	P38853	1164 aa	Known RBP	0.14	□□□□□ -2.39
snR45	snR45	TVP23	P38962	199 aa		0.14	□□□□□ -2.39
snR45	snR45	ERV46	P39727	415 aa		0.14	□□□□□ -2.39
snR45	snR45	RTR1	P40084	226 aa	Predicted RBP	0.14	□□□□□ -2.39
snR45	snR45	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.14	□□□□□ -2.39	not detected
snR45	snR45	ASG7	P46993	209 aa		0.14	□□□□□ -2.39
snR45	snR45	HLJ1	P48353	224 aa		0.14	□□□□□ -2.39
snR45	snR45	TRF5	P48561	642 aa	Known RBP	0.14	□□□□□ -2.39
snR45	snR45	AZR1	P50080	613 aa		0.14	□□□□□ -2.39
snR45	snR45	ORC5	P50874	479 aa		0.14	□□□□□ -2.39
snR45	snR45	NRM1	P53718	249 aa		0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms