RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	DPH2	P32461	534 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	PDB1	P32473	366 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	SAS3	P34218	831 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	TOD6	P34219	525 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	STB6	P36085	766 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	RPF2	P36160	344 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	APE3	P37302	537 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	CST26	P38226	397 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	MAM1	P40065	302 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	UBX6	P47049	396 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	STR3	P53101	465 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	NMA2	P53204	395 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	ATG4	P53867	494 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	YAT1	P80235	687 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	ERB1	Q04660	807 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	AIM32	Q04689	311 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	CRN1	Q06440	651 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	GPN2	Q08726	347 aa	Predicted RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	BUD7	Q08754	746 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	YPL272C	Q08984	517 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	PAR32	Q12515	295 aa	Known RBP	4.62	□□□□□ -1.67
CMR3	YPR013C	YRF1-4	O13559	1382 aa		4.62	□□□□□ -1.67
CMR3	YPR013C	YLR358C	O13565	187 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	AAC1	P04710	309 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	ALG7	P07286	448 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	VMA16	P23968	213 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	KSP1	P38691	1029 aa	Known RBP	4.61	□□□□□ -1.67
CMR3	YPR013C	OTU2	P38747	307 aa	Known RBP	4.61	□□□□□ -1.67
CMR3	YPR013C	CCT6	P39079	546 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	AFG3	P39925	761 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	GDI1	P39958	451 aa	Known RBP	4.61	□□□□□ -1.67
CMR3	YPR013C	LAS21	P40367	830 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	YIL166C	P40445	542 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	VID30	P53076	958 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	DCP2	P53550	970 aa	Known RBP	4.61	□□□□□ -1.67
CMR3	YPR013C	RNT1	Q02555	471 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	VPS38	Q05919	439 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	YDL242W	Q07746	117 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	CRT10	Q08226	957 aa		4.61	□□□□□ -1.67
CMR3	YPR013C	COX1	P00401	534 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	ARD1	P07347	238 aa	Predicted RBP	4.6	□□□□□ -1.67
CMR3	YPR013C	STE12	P13574	688 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	GAS1	P22146	559 aa	Known RBP	4.6	□□□□□ -1.67
CMR3	YPR013C	CLB1	P24868	471 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YCR051W	P25631	222 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	PAP1	P29468	568 aa	Known RBP	4.6	□□□□□ -1.67
CMR3	YPR013C	HES1	P35843	434 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YPT10	P38146	199 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	ERC1	P38767	581 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	PIH1	P38768	344 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	MTG2	P38860	518 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	CTK2	P46962	323 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	NPA3	P47122	385 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	MSY1	P48527	492 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	UBP16	Q02863	499 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YDR239C	Q03780	787 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	TRS23	Q03784	219 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YDR109C	Q04585	715 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YDR286C	Q05530	114 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	SWA2	Q06677	668 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	CDA2	Q06703	312 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	YDL073W	Q07454	984 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	BMS1	Q08965	1183 aa	Known RBP	4.6	□□□□□ -1.67
CMR3	YPR013C	ATG29	Q12092	213 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	PDH1	Q12428	516 aa	Known RBP	4.6	□□□□□ -1.67
CMR3	YPR013C	AVL9	Q12500	764 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	AI5_ALPHA	Q9ZZX1	630 aa		4.6	□□□□□ -1.67
CMR3	YPR013C	PMA1	P05030	918 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	CHO2	P05374	869 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	STE4	P18851	423 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	PRP6	P19735	899 aa	Predicted RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	AMD2	P22580	549 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	YSP3	P25036	478 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	SYN8	P31377	255 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	LAM4	P38800	1345 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	BUR6	P40096	142 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	SEC28	P40509	296 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CMR3	YPR013C	LCB2	P40970	561 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	ZIM17	P42844	174 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	SWP82	P43554	623 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CMR3	YPR013C	YJL055W	P47044	245 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	CTR1	P49573	406 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	PRP43	P53131	767 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	BNI5	P53890	448 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	YNL092W	P53934	400 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	ARG7	Q04728	441 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	RQC1	Q05468	723 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	MRD1	Q06106	887 aa	Known RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	AIM39	Q08223	395 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	PGC1	Q08959	321 aa		4.59	□□□□□ -1.67
CMR3	YPR013C	FMP40	Q08968	688 aa	Predicted RBP	4.59	□□□□□ -1.67
CMR3	YPR013C	CYB2	P00175	591 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	GAL80	P04387	435 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	PPR1	P07272	904 aa	Predicted RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	APE1	P14904	514 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	EST1	P17214	699 aa	Predicted RBP	4.58	□□□□□ -1.68
CMR3	YPR013C	LAC1	P28496	418 aa		4.58	□□□□□ -1.68
CMR3	YPR013C	CMC1	P36064	111 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms