RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W ERG27Q12452 347 aaKnown RBP5.14□□□□□ -1.59
VPS28YPL065W ILV2P07342 687 aaKnown RBP5.13□□□□□ -1.59
VPS28YPL065W COQ3P27680 312 aa5.13□□□□□ -1.59
VPS28YPL065W UBP7P40453 1071 aa5.13□□□□□ -1.59
VPS28YPL065W VPS4P52917 437 aa5.13□□□□□ -1.59
VPS28YPL065W TMA64Q04600 565 aaKnown RBP5.13□□□□□ -1.59
VPS28YPL065W PSK2Q08217 1101 aa5.13□□□□□ -1.59
VPS28YPL065W BAG7Q12128 409 aa5.13□□□□□ -1.59
VPS28YPL065W RPB2P08518 1224 aaKnown RBP5.12□□□□□ -1.59
VPS28YPL065W YER190C-BP0CX94 160 aa5.12□□□□□ -1.59
VPS28YPL065W YEL077W-AP0CX95 160 aa5.12□□□□□ -1.59
VPS28YPL065W YGR296C-BP0CX96 160 aa5.12□□□□□ -1.59
VPS28YPL065W YPL283W-BP0CX97 160 aa5.12□□□□□ -1.59
VPS28YPL065W YPR204C-AP0CX98 160 aa5.12□□□□□ -1.59
VPS28YPL065W PCT1P13259 424 aa5.12□□□□□ -1.59
VPS28YPL065W PTC6P25646 442 aa5.12□□□□□ -1.59
VPS28YPL065W GSH1P32477 678 aa5.12□□□□□ -1.59
VPS28YPL065W IMD2P38697 523 aaKnown RBP5.12□□□□□ -1.59
VPS28YPL065W YJR061WP40355 935 aa5.12□□□□□ -1.59
VPS28YPL065W IMD3P50095 523 aaKnown RBP5.12□□□□□ -1.59
VPS28YPL065W CRN1Q06440 651 aa5.12□□□□□ -1.59
VPS28YPL065W YOR389WQ08912 624 aa5.12□□□□□ -1.59
VPS28YPL065W YOR019WQ99248 730 aa5.12□□□□□ -1.59
VPS28YPL065W ILS1P09436 1072 aaKnown RBP5.11□□□□□ -1.59
VPS28YPL065W SAN1P22470 610 aa5.11□□□□□ -1.59
VPS28YPL065W SRB5P32585 307 aa5.11□□□□□ -1.59
VPS28YPL065W FTH1P38310 465 aa5.11□□□□□ -1.59
VPS28YPL065W LYS14P40971 790 aa5.11□□□□□ -1.59
VPS28YPL065W RCO1Q04779 684 aa5.11□□□□□ -1.59
VPS28YPL065W SWA2Q06677 668 aa5.11□□□□□ -1.59
VPS28YPL065W VIP1Q06685 1146 aaKnown RBP5.11□□□□□ -1.59
VPS28YPL065W LEA1Q08963 238 aaPredicted RBP5.11□□□□□ -1.59
VPS28YPL065W NUS1Q12063 375 aa5.11□□□□□ -1.59
VPS28YPL065W TFC3P34111 1160 aa5.1□□□□□ -1.59
VPS28YPL065W ALY1P36117 915 aa5.1□□□□□ -1.59
VPS28YPL065W TMA108P40462 946 aa5.1□□□□□ -1.59
VPS28YPL065W SWP82P43554 623 aa5.1□□□□□ -1.59
VPS28YPL065W SIP4P46954 829 aa5.1□□□□□ -1.59
VPS28YPL065W YPR003CP53394 754 aa5.1□□□□□ -1.59
VPS28YPL065W FCP1Q03254 732 aa5.1□□□□□ -1.59
VPS28YPL065W SNU56Q03782 492 aaKnown RBP5.1□□□□□ -1.59
VPS28YPL065W ENT4Q07872 247 aa5.1□□□□□ -1.59
VPS28YPL065W LYS21Q12122 440 aaKnown RBP5.1□□□□□ -1.59
VPS28YPL065W CDC16P09798 840 aa5.09□□□□□ -1.59
VPS28YPL065W SRP54P20424 541 aaKnown RBP5.09□□□□□ -1.59
VPS28YPL065W MAK32P23060 363 aa5.09□□□□□ -1.59
VPS28YPL065W KTR3P38130 404 aaPredicted RBP5.09□□□□□ -1.59
VPS28YPL065W ERV46P39727 415 aa5.09□□□□□ -1.59
VPS28YPL065W YRB30P53107 440 aaPredicted RBP5.09□□□□□ -1.59
VPS28YPL065W BSC5P53755 489 aa5.09□□□□□ -1.59
VPS28YPL065W NBP2Q12163 236 aa5.09□□□□□ -1.59
VPS28YPL065W SKM1Q12469 655 aa5.09□□□□□ -1.59
VPS28YPL065W ENT1Q12518 454 aa5.09□□□□□ -1.59
VPS28YPL065W AAC3P18238 307 aa5.08□□□□□ -1.6
VPS28YPL065W PAH1P32567 862 aa5.08□□□□□ -1.6
VPS28YPL065W IME4P41833 600 aa5.08□□□□□ -1.6
VPS28YPL065W DCP2P53550 970 aaKnown RBP5.08□□□□□ -1.6
VPS28YPL065W BUD7Q08754 746 aa5.08□□□□□ -1.6
VPS28YPL065W ATO2P32907 282 aa5.07□□□□□ -1.6
VPS28YPL065W GCS1P35197 352 aa5.07□□□□□ -1.6
VPS28YPL065W NTR2P36118 322 aaPredicted RBP5.07□□□□□ -1.6
VPS28YPL065W ADE17P38009 592 aaKnown RBP5.07□□□□□ -1.6
VPS28YPL065W UBP13P38187 747 aa5.07□□□□□ -1.6
VPS28YPL065W FLO5P38894 1075 aa5.07□□□□□ -1.6
VPS28YPL065W CIN1P40987 1014 aa5.07□□□□□ -1.6
VPS28YPL065W UPF3P48412 387 aaKnown RBP5.07□□□□□ -1.6
VPS28YPL065W PIL1P53252 339 aaKnown RBP5.07□□□□□ -1.6
VPS28YPL065W INN1P53901 409 aa5.07□□□□□ -1.6
VPS28YPL065W YSA1Q01976 231 aa5.07□□□□□ -1.6
VPS28YPL065W VTC3Q02725 835 aa5.07□□□□□ -1.6
VPS28YPL065W COG4Q06096 861 aa5.07□□□□□ -1.6
VPS28YPL065W SRL1Q08673 210 aa5.07□□□□□ -1.6
VPS28YPL065W GPN2Q08726 347 aaPredicted RBP5.07□□□□□ -1.6
VPS28YPL065W RRI2Q12348 645 aa5.07□□□□□ -1.6
VPS28YPL065W SUI3P09064 285 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W AIM17P23180 465 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W YCP4P25349 247 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W ESL2P36168 1195 aa5.06□□□□□ -1.6
VPS28YPL065W NOP16P40007 231 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W SLZ1P40167 298 aa5.06□□□□□ -1.6
VPS28YPL065W SEC24P40482 926 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W ARC1P46672 376 aaKnown RBP5.06□□□□□ -1.6
VPS28YPL065W MDV1P47025 714 aa5.06□□□□□ -1.6
VPS28YPL065W RPL15BP54780 204 aaPredicted RBP5.06□□□□□ -1.6
VPS28YPL065W MUB1Q03162 620 aa5.06□□□□□ -1.6
VPS28YPL065W RAD30Q04049 632 aa5.06□□□□□ -1.6
VPS28YPL065W YKU80Q04437 629 aa5.06□□□□□ -1.6
VPS28YPL065W THI3Q07471 609 aa5.06□□□□□ -1.6
VPS28YPL065W CDC24P11433 854 aaPredicted RBP5.05□□□□□ -1.6
VPS28YPL065W TOM71P38825 639 aaKnown RBP5.05□□□□□ -1.6
VPS28YPL065W ERP2P39704 215 aa5.05□□□□□ -1.6
VPS28YPL065W YAT2P40017 923 aa5.05□□□□□ -1.6
VPS28YPL065W PHM8P40025 321 aa5.05□□□□□ -1.6
VPS28YPL065W ASG1P40467 964 aa5.05□□□□□ -1.6
VPS28YPL065W YIR016WP40572 265 aa5.05□□□□□ -1.6
VPS28YPL065W CDC1P40986 491 aa5.05□□□□□ -1.6
VPS28YPL065W YGL036WP53185 909 aaPredicted RBP5.05□□□□□ -1.6
VPS28YPL065W BOP3P53958 396 aa5.05□□□□□ -1.6
VPS28YPL065W SNA4Q07549 140 aa5.05□□□□□ -1.6
VPS28YPL065W YOR111WQ99210 232 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms