RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C SPC97P38863 823 aa3.15□□□□□ -1.91
SHE4YOR035C MRX1P40050 688 aa3.15□□□□□ -1.91
SHE4YOR035C SCW4P53334 386 aaKnown RBP3.15□□□□□ -1.91
SHE4YOR035C YML131WQ03102 365 aa3.15□□□□□ -1.91
SHE4YOR035C PFA5Q03289 374 aa3.15□□□□□ -1.91
SHE4YOR035C GEP3Q08622 556 aa3.15□□□□□ -1.91
SHE4YOR035C YER145C-AA0A023PYF4 145 aa3.14□□□□□ -1.91
SHE4YOR035C GPA1P08539 472 aa3.14□□□□□ -1.91
SHE4YOR035C GUK1P15454 187 aaKnown RBP3.14□□□□□ -1.91
SHE4YOR035C ERG8P24521 451 aa3.14□□□□□ -1.91
SHE4YOR035C DPB3P27344 201 aa3.14□□□□□ -1.91
SHE4YOR035C TOM71P38825 639 aaKnown RBP3.14□□□□□ -1.91
SHE4YOR035C TPA1P40032 644 aaKnown RBP3.14□□□□□ -1.91
SHE4YOR035C KAP123P40069 1113 aaKnown RBP3.14□□□□□ -1.91
SHE4YOR035C YPT11P48559 417 aa3.14□□□□□ -1.91
SHE4YOR035C UBP8P50102 471 aa3.14□□□□□ -1.91
SHE4YOR035C NUS1Q12063 375 aa3.14□□□□□ -1.91
SHE4YOR035C YER190C-BP0CX94 160 aa3.14□□□□□ -1.91
SHE4YOR035C YEL077W-AP0CX95 160 aa3.14□□□□□ -1.91
SHE4YOR035C YGR296C-BP0CX96 160 aa3.14□□□□□ -1.91
SHE4YOR035C YPL283W-BP0CX97 160 aa3.14□□□□□ -1.91
SHE4YOR035C YPR204C-AP0CX98 160 aa3.14□□□□□ -1.91
SHE4YOR035C SRP54P20424 541 aaKnown RBP3.14□□□□□ -1.91
SHE4YOR035C CDC15P27636 974 aa3.14□□□□□ -1.91
SHE4YOR035C AXL2P38928 823 aa3.14□□□□□ -1.91
SHE4YOR035C PSD1P39006 500 aa3.14□□□□□ -1.91
SHE4YOR035C YIR016WP40572 265 aa3.14□□□□□ -1.91
SHE4YOR035C SNM1P40993 198 aa3.14□□□□□ -1.91
SHE4YOR035C YGL036WP53185 909 aaPredicted RBP3.14□□□□□ -1.91
SHE4YOR035C VTC3Q02725 835 aa3.14□□□□□ -1.91
SHE4YOR035C MRPL1Q04599 285 aa3.14□□□□□ -1.91
SHE4YOR035C VCX1Q99385 411 aa3.14□□□□□ -1.91
SHE4YOR035C ASK1P35734 292 aa3.13□□□□□ -1.91
SHE4YOR035C AAP1P37898 856 aaKnown RBP3.13□□□□□ -1.91
SHE4YOR035C SEC31P38968 1273 aaKnown RBP3.13□□□□□ -1.91
SHE4YOR035C SWP82P43554 623 aa3.13□□□□□ -1.91
SHE4YOR035C YLR455WQ06188 304 aa3.13□□□□□ -1.91
SHE4YOR035C PIG1Q06216 648 aa3.13□□□□□ -1.91
SHE4YOR035C YOR019WQ99248 730 aa3.13□□□□□ -1.91
SHE4YOR035C MGM1P32266 881 aa3.12□□□□□ -1.91
SHE4YOR035C VPS4P52917 437 aa3.12□□□□□ -1.91
SHE4YOR035C MPS1P54199 764 aa3.12□□□□□ -1.91
SHE4YOR035C SWF1Q04629 336 aa3.12□□□□□ -1.91
SHE4YOR035C SNO4Q04902 237 aa3.12□□□□□ -1.91
SHE4YOR035C HSP33Q08914 237 aaKnown RBP3.12□□□□□ -1.91
SHE4YOR035C HSP32Q08992 237 aa3.12□□□□□ -1.91
SHE4YOR035C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SHE4YOR035C PET111P08468 800 aa3.12□□□□□ -1.91
SHE4YOR035C RRN3P36070 627 aa3.12□□□□□ -1.91
SHE4YOR035C PXL1P36166 706 aa3.12□□□□□ -1.91
SHE4YOR035C KTR3P38130 404 aaPredicted RBP3.12□□□□□ -1.91
SHE4YOR035C YER010CP40011 234 aa3.12□□□□□ -1.91
SHE4YOR035C MDV1P47025 714 aa3.12□□□□□ -1.91
SHE4YOR035C VPS25P47142 202 aa3.12□□□□□ -1.91
SHE4YOR035C RSM28Q03430 361 aa3.12□□□□□ -1.91
SHE4YOR035C PSK2Q08217 1101 aa3.12□□□□□ -1.91
SHE4YOR035C SSP2Q08646 371 aa3.12□□□□□ -1.91
SHE4YOR035C FRE3Q08905 711 aa3.12□□□□□ -1.91
SHE4YOR035C ATX2Q12067 313 aa3.12□□□□□ -1.91
SHE4YOR035C TCB3Q03640 1545 aaKnown RBP3.11□□□□□ -1.91
SHE4YOR035C AIM17P23180 465 aaKnown RBP3.11□□□□□ -1.91
SHE4YOR035C ECM10P39987 644 aa3.11□□□□□ -1.91
SHE4YOR035C RPL15BP54780 204 aaPredicted RBP3.11□□□□□ -1.91
SHE4YOR035C YMR018WQ04364 514 aa3.11□□□□□ -1.91
SHE4YOR035C VPS41P38959 992 aa3.11□□□□□ -1.91
SHE4YOR035C IME4P41833 600 aa3.11□□□□□ -1.91
SHE4YOR035C NBP2Q12163 236 aa3.11□□□□□ -1.91
SHE4YOR035C CHO1P08456 276 aa3.1□□□□□ -1.91
SHE4YOR035C MRP20P32387 263 aa3.1□□□□□ -1.91
SHE4YOR035C GND1P38720 489 aaKnown RBP3.1□□□□□ -1.91
SHE4YOR035C VRG4P40107 337 aa3.1□□□□□ -1.91
SHE4YOR035C CTK2P46962 323 aa3.1□□□□□ -1.91
SHE4YOR035C EAF7P53911 425 aaKnown RBP3.1□□□□□ -1.91
SHE4YOR035C RCO1Q04779 684 aa3.1□□□□□ -1.91
SHE4YOR035C NEW1Q08972 1196 aaKnown RBP3.1□□□□□ -1.91
SHE4YOR035C YBR085C-AO43137 85 aa3.1□□□□□ -1.91
SHE4YOR035C RAP1P11938 827 aa3.1□□□□□ -1.91
SHE4YOR035C RER1P25560 188 aa3.1□□□□□ -1.91
SHE4YOR035C SSH4P32343 579 aa3.1□□□□□ -1.91
SHE4YOR035C SEC24P40482 926 aaKnown RBP3.1□□□□□ -1.91
SHE4YOR035C YFR020WP43600 232 aa3.1□□□□□ -1.91
SHE4YOR035C YNR061CP53747 219 aa3.1□□□□□ -1.91
SHE4YOR035C CBK1P53894 756 aa3.1□□□□□ -1.91
SHE4YOR035C POS5Q06892 414 aa3.1□□□□□ -1.91
SHE4YOR035C GPN2Q08726 347 aaPredicted RBP3.1□□□□□ -1.91
SHE4YOR035C ECM5Q03214 1411 aa3.09□□□□□ -1.91
SHE4YOR035C YCP4P25349 247 aaKnown RBP3.09□□□□□ -1.91
SHE4YOR035C ALY1P36117 915 aa3.09□□□□□ -1.91
SHE4YOR035C ESL2P36168 1195 aa3.09□□□□□ -1.91
SHE4YOR035C NNF2P53253 936 aa3.09□□□□□ -1.91
SHE4YOR035C GSH2Q08220 491 aa3.09□□□□□ -1.91
SHE4YOR035C YLR112WQ12130 139 aa3.09□□□□□ -1.91
SHE4YOR035C UBX3Q12229 455 aa3.09□□□□□ -1.91
SHE4YOR035C HXK2P04807 486 aaKnown RBP3.09□□□□□ -1.92
SHE4YOR035C RPB2P08518 1224 aaKnown RBP3.09□□□□□ -1.92
SHE4YOR035C TKL1P23254 680 aaKnown RBP3.09□□□□□ -1.92
SHE4YOR035C STE50P25344 346 aa3.09□□□□□ -1.92
SHE4YOR035C IST1P53843 298 aaPredicted RBP3.09□□□□□ -1.92
SHE4YOR035C IZH1Q03419 316 aa3.09□□□□□ -1.92
SHE4YOR035C RPL42AP0CX27 106 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms