RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	CDC15	P27636	974 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	TFC3	P34111	1160 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	AAP1	P37898	856 aa	Known RBP	3.22	□□□□□ -1.89
SWS2	YNL081C	MNN2	P38069	597 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	EXO84	P38261	753 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	SEC31	P38968	1273 aa	Known RBP	3.22	□□□□□ -1.89
SWS2	YNL081C	ACA1	P39970	489 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	ERR3	P42222	437 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	PSP1	P50896	841 aa	Known RBP	3.22	□□□□□ -1.89
SWS2	YNL081C	YNL234W	P53857	426 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	PFA5	Q03289	374 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	ARP10	Q04549	284 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	YMR254C	Q04838	102 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	FMP42	Q04991	504 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	STP3	Q05937	343 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	CRN1	Q06440	651 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	MCP2	Q06567	569 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	NRT1	Q08485	598 aa		3.22	□□□□□ -1.89
SWS2	YNL081C	ERG27	Q12452	347 aa	Known RBP	3.22	□□□□□ -1.89
SWS2	YNL081C	YER145C-A	A0A023PYF4	145 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	GUK1	P15454	187 aa	Known RBP	3.21	□□□□□ -1.9
SWS2	YNL081C	SRP54	P20424	541 aa	Known RBP	3.21	□□□□□ -1.9
SWS2	YNL081C	MSM1	P22438	575 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	UBP13	P38187	747 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	RPN11	P43588	306 aa	Known RBP	3.21	□□□□□ -1.9
SWS2	YNL081C	YGL260W	P53056	76 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	CSL4	P53859	292 aa	Predicted RBP	3.21	□□□□□ -1.9
SWS2	YNL081C	YNL181W	P53878	407 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	MRPL13	Q02204	264 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	DIG1	Q03063	452 aa	Known RBP	3.21	□□□□□ -1.9
SWS2	YNL081C	ARP9	Q05123	467 aa		3.21	□□□□□ -1.9
SWS2	YNL081C	TPK1	P06244	397 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	TKL1	P23254	680 aa	Known RBP	3.2	□□□□□ -1.9
SWS2	YNL081C	STE50	P25344	346 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	SAC1	P32368	623 aa	Known RBP	3.2	□□□□□ -1.9
SWS2	YNL081C	GEX2	P36173	615 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	BZZ1	P38822	633 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	MAF1	P41910	395 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	ASI1	P54074	624 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	COX17	Q12287	69 aa		3.2	□□□□□ -1.9
SWS2	YNL081C	KRS1	P15180	591 aa	Known RBP	3.19	□□□□□ -1.9
SWS2	YNL081C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SWS2	YNL081C	YCL049C	P25577	312 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	RAD16	P31244	790 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	YPK3	P38070	525 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	IST3	P40565	148 aa	Predicted RBP	3.19	□□□□□ -1.9
SWS2	YNL081C	CTK2	P46962	323 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	IML2	P47031	731 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	ESBP6	P53918	673 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	CTL1	Q03220	320 aa	Known RBP	3.19	□□□□□ -1.9
SWS2	YNL081C	RSM28	Q03430	361 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	ECM16	Q04217	1267 aa	Known RBP	3.19	□□□□□ -1.9
SWS2	YNL081C	BLS1	Q06071	122 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	TMA16	Q08687	178 aa		3.19	□□□□□ -1.9
SWS2	YNL081C	PET111	P08468	800 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	RAP1	P11938	827 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	RPB8	P20436	146 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	PPZ1	P26570	692 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	SRB5	P32585	307 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	NTR2	P36118	322 aa	Predicted RBP	3.18	□□□□□ -1.9
SWS2	YNL081C	RPT2	P40327	437 aa	Known RBP	3.18	□□□□□ -1.9
SWS2	YNL081C	COG1	P53079	417 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	IST1	P53843	298 aa	Predicted RBP	3.18	□□□□□ -1.9
SWS2	YNL081C	UBX4	P54730	416 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	FCP1	Q03254	732 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	YMR317W	Q04893	1140 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	YLR352W	Q06479	807 aa		3.18	□□□□□ -1.9
SWS2	YNL081C	CHO1	P08456	276 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-LR1	P0C2J4	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-F	P0CX61	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-GR2	P0CX62	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	UBC1	P21734	215 aa	Known RBP	3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-C	P25383	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	RPN2	P32565	945 aa	Known RBP	3.17	□□□□□ -1.9
SWS2	YNL081C	RAD24	P32641	659 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	XRS2	P33301	854 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	PTH2	P34222	208 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	LEU5	P38702	357 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	YND1	P40009	630 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	IAH1	P41734	238 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-DR2	Q03483	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-B	Q12260	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-OR2	Q12293	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-DR1	Q12392	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-OR1	Q12439	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	TY2A-DR3	Q99303	438 aa		3.17	□□□□□ -1.9
SWS2	YNL081C	PHO2	P07269	559 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	MTF2	P10849	440 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	HNM1	P19807	563 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	UME6	P39001	836 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	ECM10	P39987	644 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	SMK1	P41808	388 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	ATG27	P46989	271 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	SMC3	P47037	1230 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	SGF73	P53165	657 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	RSF1	Q05043	376 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	CSR1	Q06705	408 aa	Known RBP	3.16	□□□□□ -1.9
SWS2	YNL081C	APL5	Q08951	932 aa	Known RBP	3.16	□□□□□ -1.9
SWS2	YNL081C	NUS1	Q12063	375 aa		3.16	□□□□□ -1.9
SWS2	YNL081C	PGI1	P12709	554 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms