RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	UTP10	P42945	1769 aa	Known RBP	3.94	□□□□□ -1.78
TPM1	YNL079C	PET122	P10355	254 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	YCL049C	P25577	312 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	MSP1	P28737	362 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	MRS6	P32864	603 aa	Known RBP	3.93	□□□□□ -1.78
TPM1	YNL079C	CUE2	P36075	443 aa	Known RBP	3.93	□□□□□ -1.78
TPM1	YNL079C	FAF1	P40546	346 aa	Predicted RBP	3.93	□□□□□ -1.78
TPM1	YNL079C	SAP185	P40856	1058 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	BST1	P43571	1029 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	TAX4	P47030	604 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	COG2	P53271	262 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	ARC35	P53731	342 aa	Known RBP	3.93	□□□□□ -1.78
TPM1	YNL079C	TRS130	Q03660	1102 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	PSR2	Q07949	397 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	NDJ1	Q12366	352 aa		3.93	□□□□□ -1.78
TPM1	YNL079C	MTF2	P10849	440 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	PDE1	P22434	369 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	RRP43	P25359	394 aa	Predicted RBP	3.92	□□□□□ -1.78
TPM1	YNL079C	PEX2	P32800	271 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	ATF1	P40353	525 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	YJL043W	P47053	257 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	NPA3	P47122	385 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	IMO32	P53219	342 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	TAM41	P53230	385 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	MRPL13	Q02204	264 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	VPS20	Q04272	221 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	YML053C	Q04978	212 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	HRD3	Q05787	833 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	BUG1	Q12191	341 aa		3.92	□□□□□ -1.78
TPM1	YNL079C	NUC1	P08466	329 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	HOM2	P13663	365 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	TPM1	P17536	199 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	TRX2	P22803	104 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	GSY2	P27472	705 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	URK1	P27515	501 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	OSH3	P38713	996 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	NPR3	P38742	1146 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	SAP1	P39955	897 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	BUD16	P39988	312 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	PSF2	P40359	213 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	SAE2	P46946	345 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	LYS4	P49367	693 aa	Predicted RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	PIB2	P53191	635 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	PLM2	Q04383	521 aa		3.91	□□□□□ -1.78
TPM1	YNL079C	MRI1	Q06489	411 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	PNO1	Q99216	274 aa	Known RBP	3.91	□□□□□ -1.78
TPM1	YNL079C	UBC1	P21734	215 aa	Known RBP	3.9	□□□□□ -1.79
TPM1	YNL079C	OPI1	P21957	404 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	SIP1	P32578	815 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	XRS2	P33301	854 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	HOT13	P36078	116 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	RPF2	P36160	344 aa	Known RBP	3.9	□□□□□ -1.79
TPM1	YNL079C	MRPL36	P36531	177 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	SPO22	P40511	975 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	ZAP1	P47043	880 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	GTB1	Q04924	702 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	COQ11	Q05892	277 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	DIB1	Q06819	143 aa	Predicted RBP	3.9	□□□□□ -1.79
TPM1	YNL079C	CYK3	Q07533	885 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	POM152	P39685	1337 aa		3.9	□□□□□ -1.79
TPM1	YNL079C	DUR1,2	P32528	1835 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	SES1	P07284	462 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	KES1	P35844	434 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	EXO84	P38261	753 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	IFA38	P38286	347 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	VBA2	P38358	474 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	ERC1	P38767	581 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	SMK1	P41808	388 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	SKP2	P42843	763 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	HST1	P53685	503 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	LGE1	Q02796	332 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	MTG1	Q03151	367 aa	Predicted RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	TFC6	Q06339	672 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	SPN1	Q06505	410 aa	Predicted RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	VAM6	Q07468	1049 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	CTI6	Q08923	506 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	YPL191C	Q08930	360 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	RDL1	Q12305	139 aa	Known RBP	3.89	□□□□□ -1.79
TPM1	YNL079C	RRI2	Q12348	645 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	YNL162W-A	Q3E7A8	72 aa		3.89	□□□□□ -1.79
TPM1	YNL079C	COX1	P00401	534 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	RPL19A	P0CX82	189 aa	Known RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	RPL19B	P0CX83	189 aa	Predicted RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	ERG11	P10614	530 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	BEM3	P32873	1128 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	PSY4	P38193	441 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	APD1	P38281	316 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	YMR147W	P40218	223 aa	Known RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	HYR1	P40581	163 aa	Known RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	CIR1	P42940	261 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	YGR079W	P53249	370 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	YNL058C	P53947	316 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	YAT1	P80235	687 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	SYF1	Q04048	859 aa	Predicted RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	THI3	Q07471	609 aa		3.88	□□□□□ -1.79
TPM1	YNL079C	PRS5	Q12265	496 aa	Known RBP	3.88	□□□□□ -1.79
TPM1	YNL079C	BI2	P03873	423 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	MAK32	P23060	363 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	MBR1	P23493	339 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	PEP3	P27801	918 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms