RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W PRE2P30656 287 aaKnown RBP7.28□□□□□ -1.24
HDA1YNL021W YBL029WP38201 376 aa7.28□□□□□ -1.24
HDA1YNL021W OPY1P38271 328 aa7.28□□□□□ -1.24
HDA1YNL021W CCT6P39079 546 aa7.28□□□□□ -1.24
HDA1YNL021W SLN1P39928 1220 aaPredicted RBP7.28□□□□□ -1.24
HDA1YNL021W RTT105P40063 208 aa7.28□□□□□ -1.24
HDA1YNL021W SNF12P53628 566 aa7.28□□□□□ -1.24
HDA1YNL021W PET122P10355 254 aa7.28□□□□□ -1.24
HDA1YNL021W SNT1P25357 1226 aa7.28□□□□□ -1.24
HDA1YNL021W GYP6P32806 458 aa7.28□□□□□ -1.24
HDA1YNL021W RIB7P33312 244 aa7.28□□□□□ -1.24
HDA1YNL021W RFC5P38251 354 aa7.28□□□□□ -1.24
HDA1YNL021W MDR1P53258 950 aa7.28□□□□□ -1.24
HDA1YNL021W ERV25P54837 211 aaKnown RBP7.28□□□□□ -1.24
HDA1YNL021W APL5Q08951 932 aaKnown RBP7.28□□□□□ -1.24
HDA1YNL021W ATP2P00830 511 aaKnown RBP7.27□□□□□ -1.25
HDA1YNL021W TUF1P02992 437 aaKnown RBP7.27□□□□□ -1.25
HDA1YNL021W SMI1P32566 505 aa7.27□□□□□ -1.25
HDA1YNL021W ADH5P38113 351 aaKnown RBP7.27□□□□□ -1.25
HDA1YNL021W CST26P38226 397 aa7.27□□□□□ -1.25
HDA1YNL021W CEM1P39525 442 aa7.27□□□□□ -1.25
HDA1YNL021W PRP31P49704 494 aaPredicted RBP7.27□□□□□ -1.25
HDA1YNL021W LCL3P53153 274 aa7.27□□□□□ -1.25
HDA1YNL021W FDC1Q03034 503 aa7.27□□□□□ -1.25
HDA1YNL021W CFT2Q12102 859 aaPredicted RBP7.27□□□□□ -1.25
HDA1YNL021W TUP1P16649 713 aa7.27□□□□□ -1.25
HDA1YNL021W MDH1P17505 334 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
HDA1YNL021W STE14P32584 239 aa7.27□□□□□ -1.25
HDA1YNL021W ZAP1P47043 880 aa7.27□□□□□ -1.25
HDA1YNL021W YGL082WP53155 381 aa7.27□□□□□ -1.25
HDA1YNL021W TUB3P09734 445 aaKnown RBP7.26□□□□□ -1.25
HDA1YNL021W YCR051WP25631 222 aa7.26□□□□□ -1.25
HDA1YNL021W APE3P37302 537 aaKnown RBP7.26□□□□□ -1.25
HDA1YNL021W SFB3P38810 929 aa7.26□□□□□ -1.25
HDA1YNL021W ARB1P40024 610 aaKnown RBP7.26□□□□□ -1.25
HDA1YNL021W SLZ1P40167 298 aa7.26□□□□□ -1.25
HDA1YNL021W SSU1P41930 458 aa7.26□□□□□ -1.25
HDA1YNL021W ASI2P53895 289 aa7.26□□□□□ -1.25
HDA1YNL021W RPA49Q01080 415 aaPredicted RBP7.26□□□□□ -1.25
HDA1YNL021W YAP6Q03935 383 aa7.26□□□□□ -1.25
HDA1YNL021W VBA4Q04602 768 aaKnown RBP7.26□□□□□ -1.25
HDA1YNL021W ROY1Q04847 553 aa7.26□□□□□ -1.25
HDA1YNL021W PML1Q07930 204 aaPredicted RBP7.26□□□□□ -1.25
HDA1YNL021W APL1P27351 700 aa7.25□□□□□ -1.25
HDA1YNL021W RRM3P38766 723 aa7.25□□□□□ -1.25
HDA1YNL021W MSS4P38994 779 aa7.25□□□□□ -1.25
HDA1YNL021W BUD16P39988 312 aa7.25□□□□□ -1.25
HDA1YNL021W MRX1P40050 688 aa7.25□□□□□ -1.25
HDA1YNL021W YIL161WP40449 235 aaKnown RBP7.25□□□□□ -1.25
HDA1YNL021W YLR346CQ06139 101 aa7.25□□□□□ -1.25
HDA1YNL021W UTP10P42945 1769 aaKnown RBP7.25□□□□□ -1.25
HDA1YNL021W IME2P32581 645 aa7.25□□□□□ -1.25
HDA1YNL021W TDP1P38319 544 aa7.25□□□□□ -1.25
HDA1YNL021W GCD10P41814 478 aa7.25□□□□□ -1.25
HDA1YNL021W COS12P53053 380 aa7.25□□□□□ -1.25
HDA1YNL021W OGG1P53397 376 aaPredicted RBP7.25□□□□□ -1.25
HDA1YNL021W RGC1Q06108 1083 aaKnown RBP7.25□□□□□ -1.25
HDA1YNL021W SGO1Q08490 590 aa7.25□□□□□ -1.25
HDA1YNL021W RPN5Q12250 445 aaKnown RBP7.25□□□□□ -1.25
HDA1YNL021W RNR1P21524 888 aaKnown RBP7.24□□□□□ -1.25
HDA1YNL021W CPR2P23285 205 aa7.24□□□□□ -1.25
HDA1YNL021W PCH2P38126 564 aa7.24□□□□□ -1.25
HDA1YNL021W YHR097CP38809 366 aaKnown RBP7.24□□□□□ -1.25
HDA1YNL021W MLC1P53141 149 aa7.24□□□□□ -1.25
HDA1YNL021W CUL3P53202 744 aa7.24□□□□□ -1.25
HDA1YNL021W RNH1Q04740 348 aa7.24□□□□□ -1.25
HDA1YNL021W MRD1Q06106 887 aaKnown RBP7.24□□□□□ -1.25
HDA1YNL021W YEH1Q07804 573 aa7.24□□□□□ -1.25
HDA1YNL021W RIM20Q12033 661 aa7.24□□□□□ -1.25
HDA1YNL021W BUG1Q12191 341 aa7.24□□□□□ -1.25
HDA1YNL021W YPT6Q99260 215 aa7.24□□□□□ -1.25
HDA1YNL021W SSK22P25390 1331 aaPredicted RBP7.24□□□□□ -1.25
HDA1YNL021W DAP2P18962 818 aa7.24□□□□□ -1.25
HDA1YNL021W CLB3P24870 427 aa7.24□□□□□ -1.25
HDA1YNL021W YGL242CP53066 181 aa7.24□□□□□ -1.25
HDA1YNL021W HST1P53685 503 aa7.24□□□□□ -1.25
HDA1YNL021W REC102Q02721 264 aa7.24□□□□□ -1.25
HDA1YNL021W PPN1Q04119 674 aa7.24□□□□□ -1.25
HDA1YNL021W YLH47Q06493 454 aa7.24□□□□□ -1.25
HDA1YNL021W MCM21Q06675 368 aa7.24□□□□□ -1.25
HDA1YNL021W GAS5Q08193 484 aa7.24□□□□□ -1.25
HDA1YNL021W ECM3Q99252 613 aa7.24□□□□□ -1.25
HDA1YNL021W PDR18P53756 1333 aa7.23□□□□□ -1.25
HDA1YNL021W AUR1P36107 401 aaPredicted RBP7.23□□□□□ -1.25
HDA1YNL021W SIC1P38634 284 aa7.23□□□□□ -1.25
HDA1YNL021W PEX7P39108 375 aa7.23□□□□□ -1.25
HDA1YNL021W PZF1P39933 429 aa7.23□□□□□ -1.25
HDA1YNL021W GET2P40056 285 aa7.23□□□□□ -1.25
HDA1YNL021W OSW5P40219 148 aa7.23□□□□□ -1.25
HDA1YNL021W PFK26P40433 827 aaKnown RBP7.23□□□□□ -1.25
HDA1YNL021W EOS1P53938 366 aa7.23□□□□□ -1.25
HDA1YNL021W HRP1Q99383 534 aaKnown RBP7.23□□□□□ -1.25
HDA1YNL021W RAD51P25454 400 aa7.22□□□□□ -1.25
HDA1YNL021W UBP11P36026 717 aa7.22□□□□□ -1.25
HDA1YNL021W ZRG8P40021 1076 aa7.22□□□□□ -1.25
HDA1YNL021W SLU7Q02775 382 aaKnown RBP7.22□□□□□ -1.25
HDA1YNL021W ARR3Q06598 404 aa7.22□□□□□ -1.25
HDA1YNL021W BUD7Q08754 746 aa7.22□□□□□ -1.25
HDA1YNL021W SGT2Q12118 346 aaKnown RBP7.22□□□□□ -1.25
HDA1YNL021W PNO1Q99216 274 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms